updated documentation

Author: rmflight

DESCRIPTION

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 Package: categoryCompare2
-Version: 0.200.6
+Version: 0.200.7
 Title: Meta-Analysis of High-Throughput Experiments Using Feature
         Annotations
 Authors@R: c(

NEWS.md

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+# categoryCompare2 0.200.7
+
+- fixes a bug where setting significant annotations where there was only a single enriched object in the combined object would return zero counts for enriched, which is not correct. Added test to verify the fix (#52).
+- fixes testing bugs where numbers of things would change due to changes in GO.db or the entrez annotation packages (#53).
+
 # categoryCompare2 0.200.6
 
 - implements a method for getting a statistical table for a single `enriched_result`.
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 # categoryCompare2 0.200.3
 
-- adds the `hypergeometric_features`, `gsea_features` and `binomial_features` constructors as functions to make it easier to remember the arguments for the actual classes of the same names.
+- adds the `hypergeometric_features`, `gsea_features` and `binomial_features` constructors as functions to make it easier to remember the arguments for the actual classes of the same names (#49).
 
 # categoryCompare2 0.200.2
 
 - changes `hypergeom_features` to `hypergeometric_features`.
 - because the `hypergeometrc_features` necessitates changes to actual code written by any users, I bumped the version from *0.100* to *0.200*.
 - implements `hypergeometric_result`, `gsea_result`, and `binomial_result` as more specific classes of `enrichemnt_result`, which makes all of the combining and filtering work for everything.
-- made the vignettes use pre-processed data so that there won't be any issues from the `affy` package and segfaults.
+- made the vignettes use pre-processed data so that there won't be any issues from the `affy` package and segfaults (#50).
 
 # categoryCompare2 0.100.32
 

docs/404.html

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+Content not found. Please use links in the navbar.
+
+# Page not found (404)

docs/404.md

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+# License
+
+    YEAR: 2016
+    COPYRIGHT HOLDER: Robert M Flight