pad 1 or 2 channel images saved in gui window .stack#1471
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mrariden wants to merge 1 commit into
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To reduce memory I didn't pad the images, could we just make the gray channel open instead of red? |
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2D images loaded into the 2D CP GUI would load correctly but were incorrectly padded to 1 channel instead of 3 channels. Previously, 2 channel images were correctly padded but not 1. The input to the network requires 3 channels.
The GUI currently shows red instead of gray because this line doesn't fire:
cellpose/cellpose/gui/io.py
Line 124 in 9947b9a
The root cause of this is the different behavior of
transforms.convert_image()which guaranteed a 3 channel image.