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Update README with recent project progress
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PW45_2026_Boston/Projects/AutomaticSegmentationOfPriorityCollectionsFromImagingDataCommons/README.md

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@@ -78,12 +78,13 @@ The goal of this project is to further increase availability of anatomic segment
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This week we made progress on debugging/fixing/imporoving segmentation workflow and the associated tools.
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1. Refined post-processing component of the workflow - improved/fixed generation of DICOM SEG.
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2. Fixed handling of deflate transfer syntax in dcmqi, which was broken on windows (which was also broken in Slicer) [https://github.com/QIICR/dcmqi/pull/549](https://github.com/QIICR/dcmqi/pull/549)
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3. Adding SNOMED mapping upstream to the MOOSE segmentator [https://github.com/ENHANCE-PET/MOOSE/pull/241](https://github.com/ENHANCE-PET/MOOSE/pull/241)
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4. Started working on making the segmentation workflow applicable to segmentation of non-IDC data (via private Google bucket access)
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5. Added the option to allow Terra to access private Google buckets containing dicom files
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6. Added export of output DICOM SEG files into Google Cloud DICOM stores
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7. Added output CSVs containing performance metrics and structure metrics to the output
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* [https://github.com/Sunderlandkyl/CloudSegmentator/pull/1](https://github.com/Sunderlandkyl/CloudSegmentator/pull/1)
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3. Fixed handling of deflate transfer syntax in dcmqi, which was broken on windows (which was also broken in Slicer) [https://github.com/QIICR/dcmqi/pull/549](https://github.com/QIICR/dcmqi/pull/549)
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4. Adding SNOMED mapping upstream to the MOOSE segmentator [https://github.com/ENHANCE-PET/MOOSE/pull/241](https://github.com/ENHANCE-PET/MOOSE/pull/241)
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5. Started working on making the segmentation workflow applicable to segmentation of non-IDC data (via private Google bucket access)
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6. Added the option to allow Terra to access private Google buckets containing dicom files
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7. Added export of output DICOM SEG files into Google Cloud DICOM stores
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8. Added output CSVs containing performance metrics and structure metrics to the output
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# Illustrations
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