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testing leafcutter dockerfile
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recipes/dev/LeafCutter/Dockerfile

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@@ -18,9 +18,7 @@ RUN conda config --append channels conda-forge && \
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conda config --set restore_free_channel true
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RUN Rscript -e 'install.packages("stan", repos = "http://cran.us.r-project.org") '&& \
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Rscript -e 'devtools::install_github("stan-dev/rstantools")' && \
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Rscript -e 'devtools::install_github("davidaknowles/leafcutter/leafcutter")'
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RUN Rscript -e 'install.packages("stan", repos = "http://cran.us.r-project.org")'
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RUN conda install bioconductor-biobase bioconductor-dirichletmultinomial r-rcpp=1.0.10 r-rstan=2.21.7 r-stanheaders=2.21.0-7
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