Version 1.2.0 release of Digital Spatial Profiling (DSP) Workflow package

Includes a new method for DEG analysis for single slide analysis: linear model with no mixed effect and updated DEG output

Version 1.1.1 release of Digital Spatial Profiling (DSP) Workflow package

All changes from version 1.1.0 with updated DESCRIPTION file for version number

Version 1.1.0 release of Digital Spatial Profiling (DSP) Workflow package

Parameters were added to Filtering for the gene detection cutoffs of segment and study-wide. A parameter for customizing Sankey plots was added to Study Design and Filtering. The output of Filtering was fixed to print the genes of interest detection rate table.

Version 1.0.0 release of Digital Spatial Profiling (DSP) Workflow package

Version 1.0.0 release of Digital Spatial Profiling (DSP) Workflow package contains a functional workflow that has been fully released on NIDAP.

Version 0.9.6 release of Digital Spatial Profiling (DSP) Workflow package

Contains updates to the study design parameters for checking required field names and replacing slide name with slide_name. Also adds to normalization function for comparing boxplots from normalization techniques.

Version 0.9.5.2 release of Digital Spatial Profiling (DSP) Workflow package

Version 0.9.5.2 release of Digital Spatial Profiling (DSP) Workflow package shifts the dependencies for ggplot2 (3.3.6), ggforce (0.3.4) and NanosttingNCTools (1.2) for compatibility

Version 0.9.5.1 release of Digital Spatial Profiling (DSP) Workflow package

The DESCRIPTION was updated to match the package version numbers of the resolved NIDAP environment dsp_pkg_testing with additional updated packaged versions found in the internal CONDA channel here: https://nidap.nih.gov/workspace/data-integration/dataset/preview/ri.foundry.main.dataset.24540bf0-34da-4a4a-940f-f61753b965d1/master

Version 0.9.5 release of Digital Spatial Profiling (DSP) Workflow package

Version 0.9.5 release of Digital Spatial Profiling (DSP) Workflow package contains changes to dependencies to integrate into NIDAP.

Version 0.9.4 release of Digital Spatial Profiling (DSP) Workflow package

Version 0.9.4 release of Digital Spatial Profiling (DSP) Workflow package. Includes critical bug fixes and improvements.

Version 0.9.3 release of Digital Spatial Profiling (DSP) Workflow package

Version 0.9.3 release of the Digital Spatial Profiling (DSP) Workflow package. Includes critical bug fixes and improvements for all units.