Standardize normalize output figures across MOSuite function calls#4
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phoman14 wants to merge 13 commits into
Open
Standardize normalize output figures across MOSuite function calls#4phoman14 wants to merge 13 commits into
phoman14 wants to merge 13 commits into
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…cyclicloess (default: quantile)
Use the MOSuite plot color default for normalize-counts and update capsule help text for supplied colors, generated extras, and random fallback behavior.
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Summary
This PR aligns the normalize-counts capsule with the package-level figure standardization work. The intent is for figures produced from this capsule to match figures produced by the corresponding MOSuite function calls, rather than carrying capsule-specific color or legend defaults.
Changes
CCBR/MOSuite@FigOutSyncduring capsule setup so the capsule can use the updated package behavior before the next release image is available.FigOutSyncbranch; this PR does not target or updatemaindirectly.normalize_counts()can use the package's automatic legend text scaling for many or long labels.CHANGELOG.mdfor the user-facing default changes.@phoman14attribution to the development changelog entries for this PR.Validation: local capsule tests passed (
PASS 12).Issues
No linked issue.
PR Checklist
(
Strikethroughany points that are not applicable.)CHANGELOG.mdwith a short description of any user-facing changes and reference the PR number. Follow the style described in https://style.tidyverse.org/news.htmltestsworkflow succeeds on the latest commit.