Declare patchwork dependency and import plot_layout in Harmony.R (#85)

* Initial plan

* Fix patchwork::plot_layout unqualified usage in Harmony.R

Co-authored-by: phoman14 <21298645+phoman14@users.noreply.github.com>
Agent-Logs-Url: https://github.com/NIDAP-Community/SCWorkflow/sessions/9de58a68-7e10-4304-87be-6efae85ad882

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: phoman14 <21298645+phoman14@users.noreply.github.com>

Author: Copilot

DESCRIPTION

@@ -92,4 +92,5 @@ Imports:
     htmlwidgets,
     scDblFinder
     , BiocParallel
+    , patchwork
 Config/testthat/edition: 3

NAMESPACE

@@ -139,6 +139,7 @@ importFrom(gridExtra,arrangeGrob)
 importFrom(gridExtra,tableGrob)
 importFrom(htmlwidgets,saveWidget)
 importFrom(magrittr,"%>%")
+importFrom(patchwork,plot_layout)
 importFrom(plotly,as_widget)
 importFrom(plotly,ggplotly)
 importFrom(plotly,plot_ly)

R/Harmony.R

@@ -23,6 +23,7 @@
 #' @import gridExtra
 #' @import RColorBrewer
 #' @import ggplot2
+#' @importFrom patchwork plot_layout
 #'   
 #' @export
 #' @examples