Commit c36ed2f
evo2 dashboard mockup: per-feature WebLogo PNGs via logomaker
Each of the 11 labeled features now ships with a PWM-driven sequence
logo rendered into public/logos/feature_{id}.png by logomaker. Central
signatures are spec'd per label (Kozak ATG, TATA, polyA, CpG, Shine-
Dalgarno, bacterial -10/-35, splice donor/acceptor, stop TAA/TAG);
flanks are uniform 0-bit so the logos read as clean motif summaries
rather than noisy speckle. Unlabeled features get no logo — their
cards skip the section entirely.
make_mockup_features.py grows _build_pwm() and _render_logo(); the
metadata/atlas parquets carry a logo_path column; App.jsx detects it
optionally and excludes it from category detection; FeatureCard's
expanded view and FeatureDetailPage display the logo above the top-
activating-sequences list.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>1 parent 20a34a1 commit c36ed2f
17 files changed
Lines changed: 188 additions & 1 deletion
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- bionemo-recipes/interpretability/sparse_autoencoders/recipes/evo2
- evo2_dashboard_mockup
- public
- logos
- src
- scripts
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