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docs/hpc/09_ood/05_FileZilla.mdx

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# FileZilla
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# FileZilla in OOD
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As mentioned in [File Transfer Clients](../03_storage/03_data_transfers.md#file-transfer-clients), FileZilla is a client for transferring files. It has been installed on OOD as a convenience, but be aware that you can use many of the other methods described in the [Data Transfers](../03_storage/03_data_transfers.md) section of our documentation for transferring your files on OOD, since they all use the same underlying filesystems.
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docs/hpc/09_ood/06_Alphafold2.mdx

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# AlphaFold2
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# AlphaFold2 in OOD
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The AlphaFold2 software predicts protein structure from an amino acid sequence. Please see the paper [Highly accurate protein structure prediction with AlphaFold](https://www.nature.com/articles/s41586-021-03819-2) for details.
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docs/hpc/09_ood/07_igv.mdx

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# Integrative Genomics Viewer (IGV)
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# Integrative Genomics Viewer (IGV) in OOD
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The IGV is a high-performance, easy-to-use, interactive tool for the visual exploration of genomic data.
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docs/hpc/09_ood/09_jbrowse_genome_browser.mdx

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# JBrowse Genome Browser
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# JBrowse Genome Browser in OOD
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[JBrowse](https://jbrowse.org/jbrowse1.html) is a web-based genome browser for visualizing genomic features in common file formats, such as variants (VCF), genes (GFF3, BigBed) and gene expression (BigWig), and sequence alignments (BAM, CRAM, and GFF3).
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