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OOD Tutorials - #157

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genericdata merged 15 commits into
mainfrom
ood
Sep 16, 2025
Merged

OOD Tutorials#157
genericdata merged 15 commits into
mainfrom
ood

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@RobJY

@RobJY RobJY commented Aug 20, 2025

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Added a first pass on the remaining OOD tutorials. Please let me know if I've missed anything, anything needs to be changed, or if you have any suggestions for how they can be improved. Thanks!

@RobJY
RobJY requested a review from s-sajid-ali August 20, 2025 15:28
@RobJY RobJY self-assigned this Aug 20, 2025
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github-actions Bot commented Aug 20, 2025

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PR Preview Action v1.6.2
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2025-09-16 16:03 UTC

@RobJY

RobJY commented Aug 20, 2025

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I just ordered them alphabetically, like they are in the Interactive Apps menu, but maybe there's a better way to organize them?

@s-sajid-ali

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Alphabetical is fine by me.

@genericdata genericdata left a comment

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Remove the screenshots for the applications drop down. We'll be removing applications shortly when we move to Torch. We'll be obligated to update them, but I think it's just too much work. In fact, I'm in the process of updating most of the apps' forms so their screenshots might also differ.

Comment thread docs/hpc/09_ood/02_Alphafold2.mdx Outdated
@RobJY

RobJY commented Aug 22, 2025

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I removed the interactive apps images as suggested.
Thanks for the suggestions @genericdata !

Any other suggestions @s-sajid-ali and @genericdata ?

@s-sajid-ali

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Pinging @genericdata for approval.

@genericdata

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We can also remove

  • filezilla
  • teachopencadd
  • nglview

We'll be removing matlab too and replacing with matlab-proxy.

@RobJY you can see everything on ood-dev.hpc.nyu.edu

@RobJY

RobJY commented Sep 9, 2025

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Cool, thanks for the heads up about the dev url @genericdata ! I've removed those 3 sections and updated Matlab to use Matlab-Proxy.

How's it looking now? Please let me know if you see anything else that needs to be updated. Thanks!

@s-sajid-ali

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Can we merge this now @genericdata ?

Comment thread docs/hpc/09_ood/15_TeachOpenCADD.mdx Outdated

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We're archiving this for Torch. We can remove.

Comment thread docs/hpc/09_ood/11_NGLView.mdx Outdated

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We're archiving this for Torch. We can remove.

@genericdata
genericdata merged commit 93749bd into main Sep 16, 2025
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@s-sajid-ali
s-sajid-ali deleted the ood branch September 16, 2025 16:42
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3 participants