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# CyteTypeR
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CyteTypeR is the R version of CyteType, a single‑cell RNA‑seq cluster annnotation using multi-agent workflow <https://github.com/NygenAnalytics/CyteType>.
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Current version of this package interfaces with Seurat objects after clustering and characterize cell clusters through CyteType API.
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CyteTypeR is the R version of CyteType, a single‑cell RNA‑seq cluster annnotation using multi-agent workflow [CyteType](https://github.com/NygenAnalytics/CyteType).
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Current version of this package interfaces with **Seurat objects** after clustering and characterize cell clusters through CyteType API.
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**For AnnData .h5ad, check out the python client: [CyteType](https://github.com/NygenAnalytics/CyteType)**
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## Installation

docs/get-started.md

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# Get Started
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Steps for a basic CyteType job to get started using a sample pbmc dataset from 10X Genomics as an example.
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**For AnnData or the original python client version, check out: [CyteType](https://github.com/NygenAnalytics/CyteType)**
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## Quick Start Example
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``` R
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# Load package

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