|
1 | | -# template |
2 | | -A Template Repository for OpenSpringFest (OSF) |
| 1 | +# ECG Arrhythmia Classification using DL Models |
| 2 | + |
| 3 | +This project implements a **deep learning model using LSTM networks** to classify ECG heartbeats from the **MIT-BIH Arrhythmia Database** into different arrhythmia categories. |
| 4 | + |
| 5 | +--- |
| 6 | + |
| 7 | +## Overview |
| 8 | + |
| 9 | +- **Goal:** Automatic classification of ECG heartbeats into arrhythmia types. |
| 10 | +- **Model:** Stacked LSTM architecture for multi-class classification. |
| 11 | +- **Processing:** Automated ECG preprocessing — filtering, R-peak detection, segmentation, normalization. |
| 12 | +- **Evaluation:** Includes metrics and visualizations. |
| 13 | +- **Accuracy:** Achieves around **98% test accuracy** on MIT-BIH dataset. |
| 14 | + |
| 15 | +--- |
| 16 | + |
| 17 | +## Dataset |
| 18 | + |
| 19 | +**MIT-BIH Arrhythmia Database (PhysioNet)** |
| 20 | +- 48 half-hour two-channel ECG recordings |
| 21 | +- Sampling Rate: 360 Hz |
| 22 | +- Expert-annotated beats |
| 23 | + |
| 24 | +**Classes:** |
| 25 | +- N — Normal beats |
| 26 | +- S — Supraventricular ectopic beats |
| 27 | +- V — Ventricular ectopic beats |
| 28 | +- F — Fusion beats |
| 29 | +- Q — Unknown/Other beats |
| 30 | + |
| 31 | +--- |
| 32 | + |
| 33 | +## Model Architecture |
| 34 | +``` |
| 35 | +Input (250, 1) |
| 36 | +↓ |
| 37 | +LSTM(128, return_sequences=True) |
| 38 | +↓ |
| 39 | +Dropout + BatchNormalization |
| 40 | +↓ |
| 41 | +LSTM(64, return_sequences=True) |
| 42 | +↓ |
| 43 | +Dropout + BatchNormalization |
| 44 | +↓ |
| 45 | +LSTM(32) |
| 46 | +↓ |
| 47 | +Dropout + BatchNormalization |
| 48 | +↓ |
| 49 | +Dense(64, ReLU) → Dense(32, ReLU) |
| 50 | +↓ |
| 51 | +Dense(num_classes, Softmax) |
| 52 | +``` |
| 53 | + |
| 54 | +**Training Details:** |
| 55 | +- Optimizer: Adam (lr = 0.001) |
| 56 | +- Loss: Categorical Crossentropy |
| 57 | +- Batch Size: 128 |
| 58 | +- Max Epochs: 100 |
| 59 | +- Early Stopping and Learning Rate Scheduling enabled |
| 60 | + |
| 61 | +--- |
| 62 | + |
| 63 | +## Performance |
| 64 | + |
| 65 | +| Metric | Value | |
| 66 | +|--------|--------| |
| 67 | +| Accuracy | ~98% | |
| 68 | +| Precision | ~97% | |
| 69 | +| Recall | ~96% | |
| 70 | +| F1-Score | ~97% | |
| 71 | + |
| 72 | +**Generated Visualizations:** |
| 73 | +- Training history (accuracy/loss) |
| 74 | +- Confusion matrices |
| 75 | +- Sample predictions with confidence scores |
| 76 | +- Raw vs filtered signal comparisons |
| 77 | + |
| 78 | +--- |
| 79 | + |
| 80 | +## Workflow |
| 81 | + |
| 82 | +1. **Preprocessing** — Run: |
| 83 | + ```bash |
| 84 | + python ecg_preprocessing.ipynb |
| 85 | + |
| 86 | + ``` |
| 87 | + - Downloads MIT-BIH data |
| 88 | + - Filters noise |
| 89 | + - Segments beats and normalizes them |
| 90 | + |
| 91 | +2. **Training** — Run: |
| 92 | + |
| 93 | + ```python |
| 94 | + lstm_model.ipynb |
| 95 | + |
| 96 | + ``` |
| 97 | + - Trains the LSTM model |
| 98 | + - Saves best and final model checkpoints |
| 99 | + |
| 100 | +3. **Prediction Example:** |
| 101 | + ```python |
| 102 | + from tensorflow import keras |
| 103 | + import numpy as np |
| 104 | + |
| 105 | + model = keras.models.load_model('best_lstm_model.keras') |
| 106 | + data = np.load('ecg_mitdb_processed.npz') |
| 107 | + preds = model.predict(data['X'][:10]) |
| 108 | + classes = np.argmax(preds, axis=1) |
| 109 | + ``` |
| 110 | + |
| 111 | + ## Project Structure |
| 112 | + ``` ecg-arrhythmia-classification/ |
| 113 | + ├── ecg_preprocessing.ipynb |
| 114 | + ├── lstm_model.py |
| 115 | + ├── requirements.txt |
| 116 | + ├── README.md |
| 117 | + ├── data |
| 118 | + ├── ecg_mitdb_processed.npz |
| 119 | + ├── mitdb |
| 120 | + ├── final_lstm_model.keras |
| 121 | + ├── best_lstm_model.keras |
| 122 | + ├── evaluation_results.json |
| 123 | + └── *.png (visualizations) |
| 124 | + ``` |
| 125 | + ## Requirements |
| 126 | + ``` |
| 127 | + numpy>=1.21.0 |
| 128 | + matplotlib>=3.4.0 |
| 129 | + scipy>=1.7.0 |
| 130 | + scikit-learn>=0.24.0 |
| 131 | + tensorflow>=2.8.0 |
| 132 | + wfdb>=4.0.0 |
| 133 | + seaborn>=0.11.0 |
| 134 | + tqdm>=4.62.0 |
| 135 | + ``` |
| 136 | + |
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