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more proof reading
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docs/user-guide/tutorials/ADCP_transects.ipynb

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"The plot(s) we will produce are simple plots which follow the trajectory of the expedition as a function of distance from the start, and are intended to be a starting point for your analysis. Because the `ADCP` instrument is an underway/onboard instrument, this means we benefit from continuous recordings across the length of the ship's track (unlike overboard instruments such as CTDs which have to deployed at individual sampling sites).\n",
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"\n",
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"<div class=\"alert alert-block alert-info\"> \n",
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"<b>NOTE:</b> This notebook assumes that each point along the expedition track is further from the start than the previous point. The code will still work if not, but the resultant plots might not be very intuitive.\n",
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"<b>Note:</b> This notebook assumes that each point along the expedition track is further from the start than the previous point. The code will still work if not, but the resultant plots might not be very intuitive.\n",
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"</div>"
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]
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},
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"\n",
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"<div class=\"alert alert-block alert-success\"> \n",
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"<b>Tip:</b> You can get the path to your expedition results by navigating to to the folder in Terminal (using `cd`) and then using the `pwd` command. This will print your working directory which you can copy to the `data_dir` variable in this notebook. Don't forget to keep it as a string (in \"quotation\" marks)!\n",
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"</div>"
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"</div>\n",
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"\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 7,
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"execution_count": 2,
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"id": "0cb630f6",
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"metadata": {},
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"outputs": [],

docs/user-guide/tutorials/CTD_transects.ipynb

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},
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{
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"cell_type": "code",
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"execution_count": 46,
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"execution_count": 74,
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"id": "8de8b4ae",
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"metadata": {},
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"outputs": [],
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},
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{
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"cell_type": "code",
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"execution_count": 47,
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"execution_count": 75,
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"id": "b32d2730",
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"metadata": {},
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"outputs": [],
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" },\n",
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" \"oxygen\": {\n",
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" \"cmap\": cmo.oxy,\n",
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" \"label\": \"Dissolved oxygen (mmol m-3)\",\n",
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" \"label\": r\"Dissolved oxygen (mmol m$^{-3}$)\",\n",
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" \"ds_name\": \"o2\",\n",
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" },\n",
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" \"nitrate\": {\n",
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" \"cmap\": cmo.matter,\n",
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" \"label\": \"Nitrate (mmol m-3)\",\n",
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" \"label\": r\"Nitrate (mmol m$^{-3}$)\",\n",
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" \"ds_name\": \"no3\",\n",
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" },\n",
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" \"phosphate\": {\n",
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" \"cmap\": cmo.matter,\n",
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" \"label\": \"Phosphate (mmol m-3)\",\n",
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" \"label\": r\"Phosphate (mmol m$^{-3}$)\",\n",
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" \"ds_name\": \"po4\",\n",
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" },\n",
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" \"ph\": {\n",
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" },\n",
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" \"zooplankton\": {\n",
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" \"cmap\": cmo.algae,\n",
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" \"label\": \"Total zooplankton (mmol m-3)\",\n",
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" \"label\": r\"Total zooplankton (mmol m$^{-3}$)\",\n",
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" \"ds_name\": \"zooc\",\n",
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" },\n",
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" \"phytoplankton\": {\n",
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" \"cmap\": cmo.algae,\n",
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" \"label\": \"Total phytoplankton (mmol m-3)\",\n",
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" \"label\": r\"Total phytoplankton (mmol m$^{-3}$)\",\n",
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" \"ds_name\": \"phyc\",\n",
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" },\n",
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" \"primary_production\": {\n",
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" \"cmap\": cmo.matter,\n",
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" \"label\": \"Total primary production of phytoplankton (mg m-3 day-1)\",\n",
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" \"label\": r\"Total primary production of phytoplankton (mg m$^{-3}$ day$^{-1}$)\",\n",
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" \"ds_name\": \"nppv\",\n",
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" },\n",
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" \"chlorophyll\": {\n",
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" \"cmap\": cmo.algae,\n",
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" \"label\": \"Chlorophyll (mg m-3)\",\n",
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" \"label\": r\"Chlorophyll (mg m$^{-3}$)\",\n",
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" \"ds_name\": \"chl\",\n",
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" },\n",
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"}"
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"cell_type": "code",
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"execution_count": 76,
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"id": "13f4664b",
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"metadata": {},
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"outputs": [],
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"cell_type": "code",
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"execution_count": 77,
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"id": "785b2b35",
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"metadata": {},
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"outputs": [],
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"cell_type": "code",
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"execution_count": 78,
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"id": "f59824a1",
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"metadata": {},
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"outputs": [],

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