Skip to content

Commit 2619b3c

Browse files
committed
fix: ensure formatted results include only selected samples
1 parent 76b2957 commit 2619b3c

1 file changed

Lines changed: 4 additions & 0 deletions

File tree

workflow/scripts/format_afwdist_results.py

Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -10,6 +10,10 @@
1010

1111
logging.info("Read pairwise distances")
1212
df = pd.read_csv(snakemake.input.distances)
13+
df = df[
14+
df.sample_n.isin(snakemake.params.samples) |
15+
df.sample_m.isin(snakemake.params.samples)
16+
]
1317

1418
logging.info("Initializing formatted output")
1519
output = pd.DataFrame(

0 commit comments

Comments
 (0)