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1 parent 02533c8 commit cc6002bCopy full SHA for cc6002b
1 file changed
workflow/rules/vaf.smk
@@ -199,7 +199,7 @@ rule merge_annotation:
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params:
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ref_name = config["ALIGNMENT_REFERENCE"],
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input:
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- tsv = OUTDIR/"vaf"/"{sample}.masked.tsv",
+ tsv = OUTDIR/"vaf"/"{sample}.masked.prefiltered.tsv",
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annot = OUTDIR/"vaf"/"{sample}.vcf_fields.longer.tsv",
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output:
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tsv = OUTDIR/"vaf"/"{sample}.variants.tsv"
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