From 984075e1c3271644999a8ef334f9d42d828513bc Mon Sep 17 00:00:00 2001
From: OganM <ogan.mancarci@gmail.com>
Date: Wed, 11 Mar 2026 17:31:46 -0700
Subject: [PATCH] add path to hdf5 path in build process to allow easier
 testing

---
 gemma-cli/pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gemma-cli/pom.xml b/gemma-cli/pom.xml
index 010baac849..cd25f97286 100644
--- a/gemma-cli/pom.xml
+++ b/gemma-cli/pom.xml
@@ -29,7 +29,7 @@
                         </program>
                     </programs>
                     <!-- this allows Log4j 2 to lookup for Log4j 1.2 configuration -->
-                    <extraJvmArguments>${jvmOptions}</extraJvmArguments>
+                    <extraJvmArguments>-Djava.library.path=${hdf5.libDir} ${jvmOptions}</extraJvmArguments>
                     <!-- Gemma CLI extensions can be dropped in that folder -->
                     <endorsedDir>contrib</endorsedDir>
                 </configuration>