ci fixes

Author: S1DDHEY

base/db/R/get.trait.data.pft.R

@@ -29,7 +29,7 @@
 ##' }
 ##'
 ##' **Downstream contract:** The files `trait.data.Rdata` and
-##' `prior.distns.Rdata` are expected by [run.meta.analysis.pft()], which
+##' `prior.distns.Rdata` are expected by \link[PEcAn.meta.analysis]{run.meta.analysis.pft}], which
 ##' loads them from `pft$outdir`. This implicit file-based coupling means
 ##' the two functions must agree on directory path and object names. A future
 ##' refactoring goal is to pass these objects directly via function arguments

modules/meta.analysis/R/run.meta.analysis.R

@@ -215,7 +215,7 @@ check_consistent <- function(point, prior,
 #' }
 #'
 #' **Downstream contract:** The files `trait.mcmc.Rdata` and
-#' `post.distns.Rdata` are expected by [get.parameter.samples()] (in
+#' `post.distns.Rdata` are expected by \link[PEcAn.uncertainty]{get.parameter.samples} (in
 #' `PEcAn.uncertainty`), which loads them to generate ensemble and sensitivity
 #' analysis samples.
 #'