fix(env): change kraken2 version from 2.14 to 2.1.5 to fix conda reso… #3
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| name: Test conda envs | |
| on: [push] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| strategy: | |
| matrix: | |
| include: | |
| - env: qc_n_tax_id.yaml | |
| path: 01_QC_n_tax_id | |
| - env: diff_an.yaml | |
| path: 02_Diff_analysis | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: conda-incubator/setup-miniconda@v4 | |
| with: | |
| miniforge-version: latest | |
| activate-environment: test | |
| - run: conda env create -f ${{ matrix.path }}/${{ matrix.env }} --dry-run |