Remove ruff from main dependencies.

This caused problems when importing tabpfn in environments with older
versions of ruff.

Also, change dev/build optional dependencies to be dependency groups, as
is expected by uv.

Author: oscarkey

.github/workflows/pull_requests.yml

@@ -47,7 +47,7 @@ jobs:
 
       - name: Run Pyright
         run: |
-          uv sync --extra dev
+          uv sync --group dev
           uv run pyright
 
   test_compatibility:
@@ -84,7 +84,7 @@ jobs:
 
       # Install dev extras so pytest is available.
       - name: Install dependencies
-        run: uv sync --extra dev
+        run: uv sync --group dev
 
       - name: Run Tests
         run: uv run pytest -q

.github/workflows/release.yml

@@ -43,7 +43,7 @@ jobs:
       - name: Install dependencies
         env:
           SETUPTOOLS_SCM_PRETEND_VERSION: ${{ steps.set_version.outputs.version }}
-        run: uv sync --extra dev --group build
+        run: uv sync --group dev --group build
 
       - name: Run linting
         run: uv run ruff check

pyproject.toml

@@ -16,7 +16,7 @@ classifiers = [
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
-    "Programming Language :: Python :: 3.13"
+    "Programming Language :: Python :: 3.13",
 ]
 requires-python = ">=3.9"
 dependencies = [
@@ -28,22 +28,10 @@ dependencies = [
     "platformdirs>=4",
     "filelock>=3.19.1",
     "requests>=2.32.5",
-    "ruff>=0.11.6",
     "nvidia-ml-py>=13.590.48",
 ]
 
 [project.optional-dependencies]
-dev = [
-  "pyright>=1.1.399",
-  "pytest>=8.3",
-  "pytest-cov>=5",
-  "ruff>=0.9",
-]
-build = [
-  "hatchling>=1.25",
-  "build>=1.0.0",
-  "twine>=5.0.0",
-]
 telemetry-interactive = []
 
 [project.urls]
@@ -83,5 +71,8 @@ build = [
   "twine>=6.1.0",
 ]
 dev = [
-    "pytest>=8.3.5",
+  "pyright>=1.1.399",
+  "pytest>=8.3.5",
+  "pytest-cov>=5",
+  "ruff>=0.11.6",
 ]