Replace yesqa hook from pre-commit configuration with Ruff's RUF100 (#8692)

This pull request updates the project's linting configuration by
removing the standalone `yesqa` pre-commit hook and enabling the
equivalent rule in `ruff`. This streamlines the code quality checks and
reduces dependency complexity.

Linting configuration updates:

* Removed the `yesqa` hook from `.pre-commit-config.yaml`, eliminating
the need for its additional dependencies and exclusions.
* Enabled the `RUF100` rule in the `pyproject.toml` configuration for
`ruff`, which provides the same functionality as `yesqa` for identifying
unused `noqa` comments.

---------

Signed-off-by: jirka <jirka.borovec@seznam.cz>
Signed-off-by: Jirka Borovec <6035284+Borda@users.noreply.github.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

Author: 3 people

.pre-commit-config.yaml

@@ -37,23 +37,6 @@ repos:
               ^monai/_version.py
           )
 
-  - repo: https://github.com/asottile/yesqa
-    rev: v1.5.0
-    hooks:
-      - id: yesqa
-        name: Unused noqa
-        additional_dependencies:
-          - flake8>=3.8.1
-          - flake8-bugbear<=24.2.6
-          - flake8-comprehensions
-          - pep8-naming
-        exclude: |
-          (?x)^(
-              monai/__init__.py|
-              docs/source/conf.py|
-              tests/utils.py
-          )$
-
   - repo: https://github.com/hadialqattan/pycln
     rev: v2.6.0
     hooks:

monai/apps/nnunet/nnunetv2_runner.py

@@ -18,7 +18,7 @@
 from typing import Any
 
 import monai
-from monai.apps.nnunet.utils import NNUNETMode as M  # noqa: N814
+from monai.apps.nnunet.utils import NNUNETMode as M
 from monai.apps.nnunet.utils import analyze_data, create_new_data_copy, create_new_dataset_json
 from monai.bundle import ConfigParser
 from monai.utils import ensure_tuple, optional_import

pyproject.toml

@@ -54,7 +54,7 @@ select = [
   "W",  # pycodestyle warnings - https://docs.astral.sh/ruff/rules/#warning-w
   "NPY",         # NumPy specific rules
   "UP",          # pyupgrade
-  # "RUF100",      # aka yesqa
+  "RUF100",      # aka yesqa
 ]
 extend-ignore = [
   "E741", # ambiguous variable name