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Add skip_loss for decode-only mode: no model build, no loss, no check… Documentation #219: Commit c3b62b7 pushed by donglaiw
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Fix score inversion for uint8 affinities: use 255-score instead of 1-… Documentation #218: Commit d4f5118 pushed by donglaiw
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Skip model build when inference.saved_prediction_path is set Documentation #217: Commit 708b19b pushed by donglaiw
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Fix region graph unpacking: use ScoredEdge dict format, not numpy tuples Documentation #216: Commit e399302 pushed by donglaiw
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Move saved_prediction_path to inference config, rename decoded output… Documentation #215: Commit 9bb31b1 pushed by donglaiw
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Reuse agglomeration region graph for dust merge instead of rebuilding Documentation #214: Commit d0374ad pushed by donglaiw
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Add untracked analysis scripts and reference files Documentation #213: Commit 49d9fe2 pushed by donglaiw
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Fix branch_merge: pass seg_sizes and min_segment_size to _bbox_touch_… Documentation #212: Commit 392e019 pushed by donglaiw
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Add MedNeXt head hidden channels and update tutorials Documentation #211: Commit 4ea5897 pushed by donglaiw
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Add use_uint8 decode param, saved_prediction_path, decode-only config… Documentation #210: Commit ec4f5cf pushed by donglaiw
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Fix head:all visualization: move to default section where callback re… Documentation #209: Commit 6ecaeb2 pushed by donglaiw
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Data check visualization: log image + label channels only (no predict… Documentation #208: Commit 97bff38 pushed by donglaiw
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Store precomputed skeleton caches with source backend Documentation #207: Commit 2d68de2 pushed by donglaiw
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Zarr I/O, val skeleton precompute, data-check visualization, lazy zar… Documentation #206: Commit 8076088 pushed by donglaiw
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Reorganize tutorials, remove augmentation preset, fix skeleton coordi… Documentation #205: Commit ecd3520 pushed by donglaiw
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Normalize package layout and add MedNeXt multi-head support Documentation #204: Commit 6f90acc pushed by donglaiw
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Add seung-lab reference docs (186 repos), NEURD reference, update wat… Documentation #203: Commit a055edf pushed by donglaiw
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Add label_aux support: precomputed skeleton/SDT with cached dataset i… Documentation #202: Commit 5a0b06f pushed by donglaiw
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Optimize SDT: batch skeletonization, precomputed volume caching, new … Documentation #201: Commit 318d41e pushed by donglaiw
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Migrate shared config profiles and fix regressions Documentation #200: Commit a8097d2 pushed by donglaiw
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Add buildRegionGraphOnly fast path, fix merge scoring, update SNEMI c… Documentation #199: Commit a2fefcc pushed by donglaiw
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Set SNEMI tune trial timeout default Documentation #198: Commit b72649b pushed by donglaiw
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Fix label transform resolution and batched affinity masks Documentation #197: Commit 82424d4 pushed by donglaiw
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Fix tune trial timeout handling Documentation #196: Commit af62e50 pushed by donglaiw
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Fix loss balancing wiring and SNEMI SDT config Documentation #195: Commit ee82c46 pushed by donglaiw
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