QTIM Lab
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qtim_Tutorials
qtim_Tutorials PublicJupyter notebooks and other tutorials for medical imaging and deep learning, courtesy of the QTIM lab.
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EyeLiner
EyeLiner PublicForked from cvg/LightGlue
Automatic Longitudinal Image Registration using Fundus Landmarks (ARVO 2024)
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qtim_tools
qtim_tools PublicA set of tools used for quantitative analysis of and machine learning from 3D medical images. Created by the Quantitative Tumor Imaging Lab at Martinos.
Repositories
- procancer_fl Public
- medsam_OCT_layerseg Public
This model creates a single combined segmentation mask for the RNFL, GCL, and IPL layers for OCT bscans. It was first trained on Topcon Maestro and then spectralis OCTs.
- Topcon_OCT_Export_Tool Public
Using Topcon's Export Tool to Digest and get FDA info exported to DICOMs
- preprocessing Public
`preprocessing` is a python library and CLI tool designed for the purpose of preprocessing MRI data for Deep Learning at QTIM.
- nnunet_wrapper Public
- faf_ga_segmentation_pipeline Public
- GA_classifier Public
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