Skip to content

Commit c967abf

Browse files
authored
Merge pull request #11 from RECETOX/rewrite
Included report generation and put everything into an oop framework
2 parents f4b4e6b + 7222662 commit c967abf

422 files changed

Lines changed: 9412 additions & 126119 deletions

File tree

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

.github/workflows/actions.yml

Lines changed: 4 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -17,11 +17,13 @@ jobs:
1717
run: |
1818
python -m pip install --upgrade pip
1919
pip install -r requirements.txt
20-
- name: execute py script
20+
- name: collect stats
2121
env:
2222
github_token: '${{ secrets.RECEBOT_REPORTING_TOKEN }}'
2323
pepy_x_api_key: '${{ secrets.pepy_x_api_key }}'
24-
run: python main.py
24+
run: ./specdatri collect-stats
25+
- name: generate reports
26+
run: ./specdatri generate-reports
2527
- name: commit files
2628
run: |
2729
git config --local user.email "action@github.com"

main.py

Lines changed: 0 additions & 140 deletions
This file was deleted.
Lines changed: 13 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,13 @@
1+
month gc-meox-tms matchms ms2deepscore msmetaenhancer r-mfassignr r-ramclustr r-recetox-aplcms r-recetox-waveica r-recetox-xmsannotator rcx-tk riassigner spec2vec wtv
2+
2024-12 3 891 392 20 10 16 28 29 4 3 11 18
3+
2025-01 2 1011 434 17 5 12 20 6 5 1 20 17
4+
2025-02 10 1089 473 66 18 50 80 23 19 5 41 16
5+
2025-03 3 1155 576 16 12 13 20 5 4 1 13 16
6+
2025-04 7 1159 698 49 15 40 60 16 13 3 45 22
7+
2025-05 11 765 196 80 15 47 70 19 15 5 48 41 17
8+
2025-06 8 591 142 59 29 66 74 109 27 19 40 22 28
9+
2025-07 6 487 112 68 16 46 110 39 15 4 54 22 31
10+
2025-08 6 494 84 38 9 28 73 15 9 2 47 22 5
11+
2025-09 4 506 104 34 11 24 59 20 8 2 39 15 18
12+
2025-10 3 509 61 20 8 15 38 7 5 3 28 21 2
13+
2025-11 26 11095 10033 167 11 171 444 5 58 12 27 118 65

reports/2025/cran_downloads.tsv

Lines changed: 13 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,13 @@
1+
month RAMClustR
2+
2024-12
3+
2025-01 330
4+
2025-02 403
5+
2025-03 254
6+
2025-04 126
7+
2025-05 96
8+
2025-06 147
9+
2025-07 104
10+
2025-08 179
11+
2025-09 98
12+
2025-10 95
13+
2025-11

reports/2025/github_clones.tsv

Lines changed: 3 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,3 @@
1+
week MFAssignR MSMetaEnhancer RIAssigner gc-meox-tms matchms ms2deepscore rcx-tk recetox-aplcms recetox-msfinder recetox-waveica recetox-xMSannotator spec2vec wtv
2+
2025-W51 2 42 15 6 46 13 36 24 2 1 17 3
3+
2025-W52 14 7 191 5 6 4 2 1 2 6 1

reports/2025/github_views.tsv

Lines changed: 3 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,3 @@
1+
week MFAssignR MSMetaEnhancer RIAssigner gc-meox-tms matchms ms2deepscore rcx-tk recetox-aplcms recetox-msfinder recetox-waveica recetox-xMSannotator spec2vec wtv
2+
2025-W51 3 4 2 80 28 3 9 2 3 18
3+
2025-W52 8 3 68 22 2 1 1 11

reports/2025/pypi_downloads.tsv

Lines changed: 5 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,5 @@
1+
month MSMetaEnhancer RIAssigner gc-meox-tms matchms ms2deepscore rcx-tk spec2vec wtv
2+
2025-09
3+
2025-10 1186 33422 6617 37 4661 84
4+
2025-11 212 986 58 52893 6225 48 7410 120
5+
2025-12
Lines changed: 13 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,13 @@
1+
month gc-meox-tms matchms ms2deepscore msmetaenhancer r-mfassignr r-ramclustr r-recetox-aplcms r-recetox-waveica r-recetox-xmsannotator rcx-tk riassigner spec2vec wtv
2+
2025-01 2 1011 434 17 5 12 20 6 5 1 20 17
3+
2025-02 10 1089 473 66 18 50 80 23 19 5 41 16
4+
2025-03 3 1155 576 16 12 13 20 5 4 1 13 16
5+
2025-04 7 1159 698 49 15 40 60 16 13 3 45 22
6+
2025-05 11 765 196 80 15 47 70 19 15 5 48 41 17
7+
2025-06 8 591 142 59 29 66 74 109 27 19 40 22 28
8+
2025-07 6 487 112 68 16 46 110 39 15 4 54 22 31
9+
2025-08 6 494 84 38 9 28 73 15 9 2 47 22 5
10+
2025-09 4 506 104 34 11 24 59 20 8 2 39 15 18
11+
2025-10 3 509 61 20 8 15 38 7 5 3 28 21 2
12+
2025-11 26 11095 10033 167 11 171 444 5 58 12 27 118 65
13+
2025-12 12 1644 498 79 12 71 410 9 64 7 13 87 62

reports/2026/cran_downloads.tsv

Lines changed: 13 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,13 @@
1+
month RAMClustR
2+
2025-01
3+
2025-02 403
4+
2025-03 254
5+
2025-04 126
6+
2025-05 96
7+
2025-06 147
8+
2025-07 104
9+
2025-08 179
10+
2025-09 98
11+
2025-10 95
12+
2025-11 86
13+
2025-12

reports/2026/github_clones.tsv

Lines changed: 5 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,5 @@
1+
week MFAssignR MSMetaEnhancer RIAssigner gc-meox-tms matchms ms2deepscore rcx-tk recetox-aplcms recetox-msfinder recetox-waveica recetox-xMSannotator spec2vec wtv
2+
2025-W01 8
3+
2026-W01 5 7 99 12 1 2 10
4+
2026-W02 3 2 1 214 5 3 18 4 2
5+
2026-W03 1 22 8 1 3 3

0 commit comments

Comments
 (0)