TrueConsense/pyproject.toml at main · RIVM-bioinformatics/TrueConsense · GitHub

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[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[project]
name = "TrueConsense"
dynamic = ["version"]
description = "A nucleotide consensus caller for viral sequencing data that uses GFF data to improve accuracy"
readme = "README.md"
requires-python = ">=3.10"
license = "AGPL-3.0"
authors = [
    { name = "Florian Zwagemaker", email = "ids-bioinformatics@rivm.nl" },
    { name = "Dennis Schmitz", email = "ids-bioinformatics@rivm.nl" }
]
classifiers = [
    "Programming Language :: Python :: 3",
    "Development Status :: 4 - Beta",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "License :: OSI Approved :: GNU Affero General Public License v3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12"
]
dependencies = [
    "pysam==0.23.3",
    "pandas==2.3.*",
    "tqdm==4.59.0",
    "biopython==1.85",
    "aminoextract==0.4.1"
]

[project.urls]
homepage = "https://rivm-bioinformatics.github.io/TrueConsense/"
source-code = "https://github.com/rivm-bioinformatics/TrueConsense"

[project.scripts]
trueconsense = "TrueConsense.TrueConsense:main"
TrueConsense = "TrueConsense.TrueConsense:main"

[tool.hatch.version]
path = "TrueConsense/version.py"

[tool.isort]
atomic = true
profile = "black"
float_to_top = true
skip_gitignore = true
line_length = 88

[tool.black]
line-length = 88
target-version = ['py310', 'py311', 'py312']