graph_io_helper.cc

#include "graph_io_helper.h"

using namespace std;

/**
 *@fn void ChangeDelimiter ( const string& filein, const string& fileout, const char& new_delim )
 *
 * Changes the network file from being delimited by a pipe (|) to delimited by the given character.
 * All instances of the given character in the original network are also replaced by a pipe.
 * The result is more of a switch between the pipe character and the new delimiter character.
 *
 * @param filein File that holds the network information
 * @param fileout File to write new format to
 * @param new_delim Delimiter to change to
 */
void ChangeDelimiter(const string &filein, const string &fileout, const char &old_delim, const char &new_delim) {
    //Set up input/output
    ofstream fout(fileout.c_str());
    ifstream fin;
    openFileHarsh(&fin, filein);
    vector<string> fields, tags;

    string new_dl = "", old_dl = "";
    new_dl += new_delim;
    old_dl += old_delim;

    //Split on the old delimiter
    while (fline_tr(&fin, &fields, old_dl)) {
        for (int i = 0; i < fields.size(); i++) {
            //Split on the new delimiter
            split_tr(fields[i].c_str(), &tags, new_dl);

            //Reprint using the old delimiter
            for (int j = 0; j < tags.size() - 1; j++) {
                fout << tags[j] << old_delim;
            }
            fout << tags[tags.size() - 1];

            //Reprint with the new delimiter
            if (i < fields.size() - 1) fout << new_delim;
        }

        fout << endl;
    }

    //Clean up
    fin.close();
    fout.close();
}

void EncodeNetwork(const string &filein, const string &fileout, const char &old_delim, const char &new_delim,
                   vector<string> &lookup) {
    ofstream fout(fileout.c_str());
    ifstream fin;
    openFileHarsh(&fin, filein);
    vector<string> fields, tags;

    string new_dl = "", old_dl = "";
    new_dl += new_delim;
    old_dl += old_delim;

    map<string, int> ID;
    map<string, int>::iterator it_id;
    int next = 0;

    //Split on the old delimiter
    while (fline_tr(&fin, &fields, old_dl)) {
        if (fields.size() != 3) continue;

        if ((it_id = ID.find(fields[0])) == ID.end()) {
            fout << next << new_dl;
            ID.insert(pair<string, int>(fields[0], next++));
        } else {
            fout << it_id->second << new_dl;
        }

        if ((it_id = ID.find(fields[1])) == ID.end()) {
            fout << next << new_dl;
            ID.insert(pair<string, int>(fields[1], next++));
        } else {
            fout << it_id->second << new_dl;
        }

        fout << fields[2] << endl;
    }

    lookup.clear();
    lookup.resize(next);

    for (it_id = ID.begin(); it_id != ID.end(); it_id++) {
        lookup[it_id->second] = it_id->first;
    }

    ID.clear();

    //Clean up
    fin.close();
    fout.close();
}


void DecodeCommunities(const string &filein, const string &fileout, const char &old_delim, const char &new_delim,
                       const vector<string> &lookup) {
    ofstream fout(fileout.c_str());
    ifstream fin;
    openFileHarsh(&fin, filein);
    vector<string> fields, tags;

    string new_dl = "", old_dl = "";
    new_dl += new_delim;
    old_dl += old_delim;

    //Split on the old delimiter
    while (fline_tr(&fin, &fields, old_dl)) {
        int first = str_to<int>(fields[0]);
        fout << lookup[first];

        for (int i = 1; i < fields.size(); i++) {
            fout << new_dl << lookup[str_to<int>(fields[i])];
        }

        fout << endl;
    }
    //Clean up
    fin.close();
    fout.close();
}