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Updated test file
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inst/tests/froll.Rraw

Lines changed: 58 additions & 58 deletions
Original file line numberDiff line numberDiff line change
@@ -308,36 +308,36 @@ test(6000.0671, frollmean(c(1:2,NA,4:10), 4), c(rep(NA_real_, 6), 5.5, 6.5, 7.5,
308308
"frollfunR: 1:",
309309
"frollmeanFast: running for input length 10, window 4, hasnf 0, narm 0",
310310
"frollmeanFast: non-finite values are present in input, skip non-finite unaware attempt and run with extra care for NFs straighaway",
311-
"frollfun: processing fun 0 algo 0 took.*",
311+
"frollfun: processing fun MEAN algo fast took.*",
312312
"frollfunR: processing.*took.*"
313-
))
313+
)) #7021
314314
test(6000.0672, frollmean(c(1:2,NA,4:10), 4, has.nf=FALSE), c(rep(NA_real_, 6), 5.5, 6.5, 7.5, 8.5), output=c(
315315
"frollfunR: allocating memory for results 1x1",
316316
"frollfunR: .*sequentially.*single rolling computation.*",
317317
"frollfunR: 1:",
318318
"frollmeanFast: running for input length 10, window 4, hasnf -1, narm 0",
319319
"frollmeanFast: non-finite values are present in input, skip non-finite unaware attempt and run with extra care for NFs straighaway",
320-
"frollfun: processing fun 0 algo 0 took.*",
320+
"frollfun: processing fun MEAN algo fast took.*",
321321
"frollfunR: processing.*took.*"
322-
), warning="has.nf=FALSE used but non-finite values are present in input, use default has.nf=NA to avoid this warning")
322+
), warning="has.nf=FALSE used but non-finite values are present in input, use default has.nf=NA to avoid this warning") #7021
323323
test(6000.0673, frollmean(c(1:2,NA,4:10), 2, has.nf=FALSE), c(NA, 1.5, NA, NA, 4.5, 5.5, 6.5, 7.5, 8.5, 9.5), output=c(
324324
"frollfunR: allocating memory for results 1x1",
325325
"frollfunR: .*sequentially.*single rolling computation.*",
326326
"frollfunR: 1:",
327327
"frollmeanFast: running for input length 10, window 2, hasnf -1, narm 0",
328328
"frollmeanFast: non-finite values are present in input, re-running with extra care for NFs",
329-
"frollfun: processing fun 0 algo 0 took.*",
329+
"frollfun: processing fun MEAN algo fast took.*",
330330
"frollfunR: processing.*took.*"
331-
), warning="has.nf=FALSE used but non-finite values are present in input, use default has.nf=NA to avoid this warning")
331+
), warning="has.nf=FALSE used but non-finite values are present in input, use default has.nf=NA to avoid this warning") #7021
332332
test(6000.0674, frollmean(c(1:2,NA,4:10), 4, align="center"), c(rep(NA_real_, 4), 5.5, 6.5, 7.5, 8.5, NA, NA), output=c(
333333
"frollfunR: allocating memory for results 1x1",
334334
"frollfunR: .*sequentially.*single rolling computation.*",
335335
"frollmeanFast: running for input length 10, window 4, hasnf 0, narm 0",
336336
"frollmeanFast: non-finite values are present in input, skip non-finite unaware attempt and run with extra care for NFs straighaway",
337337
"frollfun: align 0, shift answer by -2",
338-
"frollfun: processing fun 0 algo 0 took.*",
338+
"frollfun: processing fun MEAN algo fast took.*",
339339
"frollfunR: processing.*took.*"
340-
))
340+
)) #7021
341341
options(datatable.verbose=FALSE)
342342

343343
#### fill constant
@@ -436,17 +436,17 @@ test(6000.1196, frollmean(c(1:5,NA), 1:6, algo="exact", na.rm=TRUE, adaptive=TRU
436436
"frollfunR: 1:",
437437
"frolladaptivemeanExact: running in parallel for input length 6, hasnf 0, narm 1",
438438
"frolladaptivemeanExact: non-finite values are present in input, re-running with extra care for NFs",
439-
"frolladaptivefun: processing fun 0 algo 1 took.*",
439+
"frolladaptivefun: processing fun MEAN algo exact took.*",
440440
"frollfunR: processing.*took.*"
441-
))
441+
)) #7021
442442
#### exact na.rm=TRUE verbose=TRUE
443443
test(6000.1197, frollmean(c(1:5,NA), 2, algo="exact", na.rm=TRUE), output=c(
444444
"frollfunR: allocating memory for results 1x1",
445445
"frollfunR: .*algo='exact' is already parallelised.*",
446446
"frollfunR: 1:",
447447
"frollmeanExact: running in parallel for input length 6, window 2, hasnf 0, narm 1",
448448
"frollmeanExact: non-finite values are present in input, re-running with extra care for NFs",
449-
"frollfun: processing fun 0 algo 1 took.*",
449+
"frollfun: processing fun MEAN algo exact took.*",
450450
"frollfunR: processing.*took.*"
451451
))
452452
options(datatable.verbose=FALSE)
@@ -675,82 +675,82 @@ test(6000.171, frollmean(x, n), output=c(
675675
"frollfunR: .*sequentially.*single rolling computation.*",
676676
"frollfunR: 1:",
677677
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
678-
"frollfun: processing fun 0 algo 0 took.*",
679-
"frollfunR: processing.*took.*"))
678+
"frollfun: processing fun MEAN algo fast took.*",
679+
"frollfunR: processing.*took.*")) #7021
680680
test(6000.172, frollmean(list(x, x+1), n), output=c(
681681
"frollfunR: allocating memory for results 2x1",
682682
"frollfunR: .*in parallel.*",
683683
"frollfunR: 1:",
684684
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
685-
"frollfun: processing fun 0 algo 0 took.*",
685+
"frollfun: processing fun MEAN algo fast took.*",
686686
"frollfunR: 2:",
687687
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
688-
"frollfun: processing fun 0 algo 0 took.*",
689-
"frollfunR: processing.*took.*"))
688+
"frollfun: processing fun MEAN algo fast took.*",
689+
"frollfunR: processing.*took.*")) #7021
690690
test(6000.173, frollmean(x, c(n, n+1)), output=c(
691691
"frollfunR: allocating memory for results 1x2",
692692
"frollfunR: .*in parallel.*",
693693
"frollfunR: 1:",
694694
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
695-
"frollfun: processing fun 0 algo 0 took.*",
695+
"frollfun: processing fun MEAN algo fast took.*",
696696
"frollfunR: 2:",
697697
"frollmeanFast: running for input length 10, window 4, hasnf 0, narm 0",
698-
"frollfun: processing fun 0 algo 0 took.*",
699-
"frollfunR: processing.*took.*"))
698+
"frollfun: processing fun MEAN algo fast took.*",
699+
"frollfunR: processing.*took.*")) #7021
700700
test(6000.174, frollmean(list(x, x+1), c(n, n+1)), output=c(
701701
"frollfunR: allocating memory for results 2x2",
702702
"frollfunR: .*in parallel.*",
703703
"frollfunR: 1:",
704704
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
705-
"frollfun: processing fun 0 algo 0 took.*",
705+
"frollfun: processing fun MEAN algo fast took.*",
706706
"frollfunR: 2:",
707707
"frollmeanFast: running for input length 10, window 4, hasnf 0, narm 0",
708-
"frollfun: processing fun 0 algo 0 took.*",
708+
"frollfun: processing fun MEAN algo fast took.*",
709709
"frollfunR: 3:",
710710
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
711-
"frollfun: processing fun 0 algo 0 took.*",
711+
"frollfun: processing fun MEAN algo fast took.*",
712712
"frollfunR: 4:",
713713
"frollmeanFast: running for input length 10, window 4, hasnf 0, narm 0",
714-
"frollfun: processing fun 0 algo 0 took.*",
715-
"frollfunR: processing.*took.*"))
714+
"frollfun: processing fun MEAN algo fast took.*",
715+
"frollfunR: processing.*took.*")) #7021
716716
test(6000.175, frollmean(x, n, algo="exact"), output=c(
717717
"frollfunR: allocating memory for results 1x1",
718718
"frollfunR: .*algo='exact' is already parallelised.*",
719719
"frollfunR: 1:",
720720
"frollmeanExact: running in parallel for input length 10, window 3, hasnf 0, narm 0",
721-
"frollfun: processing fun 0 algo 1 took.*",
722-
"frollfunR: processing.*took.*"))
721+
"frollfun: processing fun MEAN algo exact took.*",
722+
"frollfunR: processing.*took.*")) #7021
723723
test(6000.176, frollmean(x, n, align="center"), output=c(
724724
"frollfunR: allocating memory for results 1x1",
725725
"frollfunR: .*sequentially.*single rolling computation.*",
726726
"frollfunR: 1:",
727727
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
728728
"frollfun: align 0, shift answer by -1",
729-
"frollfun: processing fun 0 algo 0 took.*",
730-
"frollfunR: processing.*took.*"))
729+
"frollfun: processing fun MEAN algo fast took.*",
730+
"frollfunR: processing.*took.*")) #7021
731731
test(6000.177, frollmean(x, n, align="left"), output=c(
732732
"frollfunR: allocating memory for results 1x1",
733733
"frollfunR: .*sequentially.*single rolling computation.*",
734734
"frollfunR: 1:",
735735
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
736736
"frollfun: align -1, shift answer by -2",
737-
"frollfun: processing fun 0 algo 0 took.*",
738-
"frollfunR: processing.*took.*"))
737+
"frollfun: processing fun MEAN algo fast took.*",
738+
"frollfunR: processing.*took.*")) #7021
739739
nn = c(1:4,2:3,1:4)
740740
test(6000.178, frollmean(x, nn, adaptive=TRUE), output=c(
741741
"frollfunR: allocating memory for results 1x1",
742742
"frollfunR: .*sequentially because adaptive.*",
743743
"frollfunR: 1:",
744744
"frolladaptivemeanFast: running for input length 10, hasnf 0, narm 0",
745-
"frolladaptivefun: processing fun 0 algo 0 took.*",
746-
"frollfunR: processing.*took.*"))
745+
"frolladaptivefun: processing fun MEAN algo fast took.*",
746+
"frollfunR: processing.*took.*")) #7021
747747
test(6000.179, frollmean(x, nn, algo="exact", adaptive=TRUE), output=c(
748748
"frollfunR: allocating memory for results 1x1",
749749
"frollfunR: .*algo='exact' is already parallelised.*",
750750
"frollfunR: 1:",
751751
"frolladaptivemeanExact: running in parallel for input length 10, hasnf 0, narm 0",
752-
"frolladaptivefun: processing fun 0 algo 1 took.*",
753-
"frollfunR: processing.*took.*"))
752+
"frolladaptivefun: processing fun MEAN algo exact took.*",
753+
"frollfunR: processing.*took.*")) #7021
754754

755755
x[8] = NA
756756
test(6000.180, frollmean(x, n), output=c(
@@ -759,59 +759,59 @@ test(6000.180, frollmean(x, n), output=c(
759759
"frollfunR: 1:",
760760
"frollmeanFast: running for input length 10, window 3, hasnf 0, narm 0",
761761
"frollmeanFast: non-finite values are present in input, re-running with extra care for NFs",
762-
"frollfun: processing fun 0 algo 0 took.*",
763-
"frollfunR: processing.*took.*"))
762+
"frollfun: processing fun MEAN algo fast took.*",
763+
"frollfunR: processing.*took.*")) #7021
764764
test(6000.181, frollmean(x, n, algo="exact"), output=c(
765765
"frollfunR: allocating memory for results 1x1",
766766
"frollfunR: .*algo='exact' is already parallelised.*",
767767
"frollfunR: 1:",
768768
"frollmeanExact: running in parallel for input length 10, window 3, hasnf 0, narm 0",
769769
"frollmeanExact: non-finite values are present in input, na.rm=FALSE and algo='exact' propagates NFs properply, no need to re-run",
770-
"frollfun: processing fun 0 algo 1 took.*",
771-
"frollfunR: processing.*took.*"))
770+
"frollfun: processing fun MEAN algo exact took.*",
771+
"frollfunR: processing.*took.*")) #7021
772772
test(6000.182, frollmean(x, nn, adaptive=TRUE), output=c(
773773
"frollfunR: allocating memory for results 1x1",
774774
"frollfunR: .*sequentially because adaptive.*",
775775
"frollfunR: 1:",
776776
"frolladaptivemeanFast: running for input length 10, hasnf 0, narm 0",
777777
"frolladaptivemeanFast: non-finite values are present in input, re-running with extra care for NFs",
778-
"frolladaptivefun: processing fun 0 algo 0 took.*",
779-
"frollfunR: processing.*took.*"))
778+
"frolladaptivefun: processing fun MEAN algo fast took.*",
779+
"frollfunR: processing.*took.*")) #7021
780780
test(6000.183, frollmean(x, nn, algo="exact", adaptive=TRUE), output=c(
781781
"frollfunR: allocating memory for results 1x1",
782782
"frollfunR: .*algo='exact' is already parallelised.*",
783783
"frollfunR: 1:",
784784
"frolladaptivemeanExact: running in parallel for input length 10, hasnf 0, narm 0",
785785
"frolladaptivemeanExact: non-finite values are present in input, na.rm=FALSE and algo='exact' propagates NFs properply, no need to re-run",
786-
"frolladaptivefun: processing fun 0 algo 1 took.*",
787-
"frollfunR: processing.*took.*"))
786+
"frolladaptivefun: processing fun MEAN algo exact took.*",
787+
"frollfunR: processing.*took.*")) #7021
788788

789789
d = as.data.table(list(1:10/2, 10:1/4))
790790
test(6000.184, frollmean(d[,1], 3, algo="exact"), output=c(
791791
"frollfunR: allocating memory for results 1x1",
792792
"frollfunR: .*algo='exact' is already parallelised.*",
793793
"frollfunR: 1:",
794794
"frollmeanExact: running in parallel for input length 10, window 3, hasnf 0, narm 0",
795-
"frollfun: processing fun 0 algo 1 took.*",
795+
"frollfun: processing fun MEAN algo exact took.*",
796796
"frollfunR: processing.*took.*"
797-
))
797+
)) #7021
798798
test(6000.185, frollmean(d, 3:4, algo="exact"), output=c(
799799
"frollfunR: allocating memory for results 2x2",
800800
"frollfunR: .*sequentially.*algo='exact'.*already parallelised.*",
801801
"frollfunR: 1:",
802802
"frollmeanExact: running in parallel for input length 10, window 3, hasnf 0, narm 0",
803-
"frollfun: processing fun 0 algo 1 took.*",
803+
"frollfun: processing fun MEAN algo exact took.*",
804804
"frollfunR: 2:",
805805
"frollmeanExact: running in parallel for input length 10, window 4, hasnf 0, narm 0",
806-
"frollfun: processing fun 0 algo 1 took.*",
806+
"frollfun: processing fun MEAN algo exact took.*",
807807
"frollfunR: 3:",
808808
"frollmeanExact: running in parallel for input length 10, window 3, hasnf 0, narm 0",
809-
"frollfun: processing fun 0 algo 1 took.*",
809+
"frollfun: processing fun MEAN algo exact took.*",
810810
"frollfunR: 4:",
811811
"frollmeanExact: running in parallel for input length 10, window 4, hasnf 0, narm 0",
812-
"frollfun: processing fun 0 algo 1 took.*",
812+
"frollfun: processing fun MEAN algo exact took.*",
813813
"frollfunR: processing.*took.*"
814-
))
814+
)) #7021
815815
options(datatable.verbose=FALSE)
816816

817817
## test warnings
@@ -861,9 +861,9 @@ options(datatable.verbose=FALSE)
861861

862862
## frollmax adaptive
863863
options(datatable.verbose=TRUE) ## adaptive frollmax no fast algo
864-
test(6000.3, frollmax(1:4, c(2,2,2,2), adaptive=TRUE), output="frolladaptivefun: algo 0 not implemented, fall back to 1")
865-
test(6000.3001, frollmax(1:4, c(2,2,2,2), algo="fast", adaptive=TRUE), output="frolladaptivefun: algo 0 not implemented, fall back to 1")
866-
test(6000.3002, frollmax(1:4, c(2,2,2,2), algo="exact", adaptive=TRUE), notOutput="frolladaptivefun: algo 0 not implemented, fall back to 1")
864+
test(6000.3, frollmax(1:4, c(2,2,2,2), adaptive=TRUE), output="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
865+
test(6000.3001, frollmax(1:4, c(2,2,2,2), algo="fast", adaptive=TRUE), output="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
866+
test(6000.3002, frollmax(1:4, c(2,2,2,2), algo="exact", adaptive=TRUE), notOutput="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
867867
options(datatable.verbose=FALSE)
868868
n = c(3,2,2,4,2,1,4,8)
869869
x = c(7,2,3,6,3,2,6,6) # no NA
@@ -1022,9 +1022,9 @@ test(6000.564, frollapply(FUN=mean, 1:3, list(c(0,-1,1)), adaptive=TRUE), error=
10221022

10231023
## frollmin adaptive
10241024
options(datatable.verbose=TRUE) ## adaptive frollmin no fast algo
1025-
test(6000.6, frollmin(1:4, c(2,2,2,2), adaptive=TRUE), output="frolladaptivefun: algo 0 not implemented, fall back to 1")
1026-
test(6000.6001, frollmin(1:4, c(2,2,2,2), algo="fast", adaptive=TRUE), output="frolladaptivefun: algo 0 not implemented, fall back to 1")
1027-
test(6000.6002, frollmin(1:4, c(2,2,2,2), algo="exact", adaptive=TRUE), notOutput="frolladaptivefun: algo 0 not implemented, fall back to 1")
1025+
test(6000.6, frollmin(1:4, c(2,2,2,2), adaptive=TRUE), output="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
1026+
test(6000.6001, frollmin(1:4, c(2,2,2,2), algo="fast", adaptive=TRUE), output="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
1027+
test(6000.6002, frollmin(1:4, c(2,2,2,2), algo="exact", adaptive=TRUE), notOutput="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
10281028
options(datatable.verbose=FALSE)
10291029
n = c(3,2,2,4,2,1,4,8)
10301030
x = c(7,2,3,6,3,2,6,6) # no NA
@@ -1200,7 +1200,7 @@ test(6000.931, frollprod(1:3, 2), c(NA, 2, 6), output="frollprodFast: running fo
12001200
test(6000.932, frollprod(1:3, 2, align="left"), c(2, 6, NA), output="frollfun: align")
12011201
test(6000.933, frollprod(c(1,2,NA), 2), c(NA, 2, NA), output="non-finite values are present in input, re-running with extra care for NFs")
12021202
test(6000.934, frollprod(c(NA,2,3), 2), c(NA, NA, 6), output="non-finite values are present in input, skip non-finite inaware attempt and run with extra care for NFs straighaway")
1203-
test(6000.935, frollprod(1:3, c(2,2,2), adaptive=TRUE), c(NA, 2, 6), output="algo 0 not implemented, fall back to 1")
1203+
test(6000.935, frollprod(1:3, c(2,2,2), adaptive=TRUE), c(NA, 2, 6), output="algo fast not implemented, fall back to exact") #7021
12041204
test(6000.936, frollprod(c(NA,2,3), c(2,2,2), adaptive=TRUE), c(NA, NA, 6), output="non-finite values are present in input, na.rm=FALSE and algo='exact' propagates NFs properply, no need to re-run")
12051205
options(datatable.verbose=FALSE)
12061206
# floating point overflow
@@ -1433,7 +1433,7 @@ test(6001.715, frollvar(1:3, 0, algo="exact"), c(NA_real_,NA_real_,NA_real_), op
14331433
test(6001.716, frollvar(c(1:2,NA), 0, algo="exact"), c(NA_real_,NA_real_,NA_real_))
14341434
test(6001.717, frollvar(c(1:2,NA), 0, algo="exact", na.rm=TRUE), c(NA_real_,NA_real_,NA_real_))
14351435
test(6001.718, frollvar(c(1:2,NA), 2), c(NA,0.5,NA), options=c("datatable.verbose"=TRUE), output="redirecting to frollvarExact")
1436-
test(6001.721, frollvar(adaptive=TRUE, 1:3, c(2,0,2)), c(NA,NA,0.5), options=c("datatable.verbose"=TRUE), output="not implemented, fall back to")
1436+
test(6001.721, frollvar(adaptive=TRUE, 1:3, c(2,0,2)), c(NA,NA,0.5), options=c("datatable.verbose"=TRUE), output="algo fast not implemented, fall back to exact") #7021
14371437
test(6001.722, frollvar(adaptive=TRUE, 1:3, c(2,0,2), fill=99), c(99,NA,0.5))
14381438
test(6001.723, frollvar(adaptive=TRUE, c(1:2,NA), c(2,0,2)), c(NA_real_,NA_real_,NA_real_))
14391439
test(6001.724, frollvar(adaptive=TRUE, c(1:2,NA), c(2,0,2), na.rm=TRUE), c(NA_real_,NA_real_,NA_real_))
@@ -1492,7 +1492,7 @@ test(6001.8194, frollsd(c(NA,2:3), 2, has.nf=FALSE), c(NA,NA,sqrt(0.5)), warning
14921492
test(6001.8195, frollsd(c(NA,2:3), 2), c(NA,NA,sqrt(0.5)), options=c("datatable.verbose"=TRUE), output="skip non-finite inaware attempt and run with extra care")
14931493
test(6001.8196, frollsd(c(NA,2:3), 2, has.nf=FALSE, algo="exact"), c(NA,NA,sqrt(0.5)), warning="used but non-finite values are present in input")
14941494
test(6001.8197, frollsd(c(NA,2:3), 2, algo="exact", na.rm=TRUE), c(NA,NA,sqrt(0.5)), options=c("datatable.verbose"=TRUE), output="re-running with extra care for NF")
1495-
test(6001.8201, frollsd(adaptive=TRUE, 1:3, c(2,2,2)), c(NA,sqrt(0.5),sqrt(0.5)), options=c("datatable.verbose"=TRUE), output="frolladaptivefun: algo 0 not implemented, fall back to 1")
1495+
test(6001.8201, frollsd(adaptive=TRUE, 1:3, c(2,2,2)), c(NA,sqrt(0.5),sqrt(0.5)), options=c("datatable.verbose"=TRUE), output="frolladaptivefun: algo fast not implemented, fall back to exact") #7021
14961496
test(6001.8202, frollsd(adaptive=TRUE, 1:3, c(2,2,2)), c(NA,sqrt(0.5),sqrt(0.5)), options=c("datatable.verbose"=TRUE), output="frolladaptivesdExact: calling sqrt(frolladaptivevarExact(...))")
14971497
test(6001.821, frollsd(adaptive=TRUE, 1:3, c(2,0,2)), c(NA,NA,sqrt(0.5)))
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test(6001.822, frollsd(adaptive=TRUE, 1:3, c(2,0,2), fill=99), c(99,NA,sqrt(0.5)))

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