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Add missing function call to calculate transport properties for seed
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rmgpy/rmg/main.py

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@@ -335,6 +335,9 @@ def initialize(self, args):
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# DON'T generate any more reactions for the seed species at this time
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for seedMechanism in self.seedMechanisms:
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self.reactionModel.addSeedMechanismToCore(seedMechanism, react=False)
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for spec in self.reactionModel.core.species:
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spec.generateTransportData(self.database)
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# Reaction libraries: add species and reactions from reaction library to the edge so
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# that RMG can find them if their rates are large enough

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