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doneranclJacksonBurns
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set size_threshold default to zero
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rmgpy/molecule/fragment.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -836,7 +836,7 @@ def from_rdkit_mol(self, rdkitmol, atom_replace_dict=None):
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return self
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def cut_molecule(self, output_smiles=False, cut_through=True, size_threshold=None):
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def cut_molecule(self, output_smiles=False, cut_through=True, size_threshold=5):
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"""
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For given input, output a list of cut fragments (either string or Fragment).
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if output_smiles = True, the output list of fragments will be smiles.

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