Merge pull request #13909 from SORMAS-Foundation/bugfix-13851-database-export

Fixes issue where database export was failing

Author: roldy

sormas-backend/src/main/java/de/symeda/sormas/backend/importexport/DatabaseExportService.java

@@ -44,6 +44,9 @@
 import de.symeda.sormas.api.importexport.DatabaseTable;
 import de.symeda.sormas.backend.action.Action;
 import de.symeda.sormas.backend.activityascase.ActivityAsCase;
+import de.symeda.sormas.backend.adverseeventsfollowingimmunization.entity.AdverseEvents;
+import de.symeda.sormas.backend.adverseeventsfollowingimmunization.entity.Aefi;
+import de.symeda.sormas.backend.adverseeventsfollowingimmunization.entity.AefiInvestigation;
 import de.symeda.sormas.backend.campaign.Campaign;
 import de.symeda.sormas.backend.campaign.data.CampaignFormData;
 import de.symeda.sormas.backend.campaign.diagram.CampaignDiagramDefinition;
@@ -120,15 +123,16 @@
 
 /**
  * Exporting data directly from the PostgreSQL database with COPY commands as .csv files.
- * 
+ *
  * @author Stefan Kock
  */
 @Stateless
 @LocalBean
 public class DatabaseExportService {
 
 	private static final String COPY_SINGLE_TABLE = "COPY (SELECT * FROM %s) TO STDOUT WITH (FORMAT CSV, DELIMITER '%s', HEADER)";
-	public static final String COUNT_TABLE_COLUMNS = "SELECT COUNT(column_name) FROM information_schema.columns WHERE table_name=:tableName";
+	public static final String COUNT_TABLE_COLUMNS =
+		"SELECT COUNT(column_name) FROM information_schema.columns WHERE table_name=CAST(:tableName AS text)";
 
 	static final Map<DatabaseTable, String> EXPORT_CONFIGS = new LinkedHashMap<>();
 
@@ -160,6 +164,9 @@ public class DatabaseExportService {
 		EXPORT_CONFIGS.put(DatabaseTable.TRAVEL_ENTRIES, TravelEntry.TABLE_NAME);
 		EXPORT_CONFIGS.put(DatabaseTable.IMMUNIZATIONS, Immunization.TABLE_NAME);
 		EXPORT_CONFIGS.put(DatabaseTable.VACCINATIONS, Vaccination.TABLE_NAME);
+		EXPORT_CONFIGS.put(DatabaseTable.ADVERSE_EVENTS_FOLLOWING_IMMUNIZATIONS, Aefi.TABLE_NAME);
+		EXPORT_CONFIGS.put(DatabaseTable.ADVERSE_EVENTS_FOLLOWING_IMMUNIZATION_INVESTIGATIONS, AefiInvestigation.TABLE_NAME);
+		EXPORT_CONFIGS.put(DatabaseTable.ADVERSE_EVENTS, AdverseEvents.TABLE_NAME);
 		EXPORT_CONFIGS.put(DatabaseTable.SAMPLES, Sample.TABLE_NAME);
 		EXPORT_CONFIGS.put(DatabaseTable.PATHOGEN_TESTS, PathogenTest.TABLE_NAME);
 		EXPORT_CONFIGS.put(DatabaseTable.ADDITIONAL_TESTS, AdditionalTest.TABLE_NAME);
@@ -283,7 +290,7 @@ private void addDataRows(DatabaseTable databaseTable, String tableName, Writer w
 
 	/**
 	 * Run an export command and write the result directly into a Writer
-	 * 
+	 *
 	 * @param writer
 	 * @param sql
 	 *            Actual native sql command to copy data to CSV.

sormas-backend/src/test/java/de/symeda/sormas/backend/importexport/DatabaseExportServiceTest.java

@@ -23,7 +23,6 @@
 import com.tngtech.archunit.core.importer.ClassFileImporter;
 
 import de.symeda.sormas.api.importexport.DatabaseTable;
-import de.symeda.sormas.backend.adverseeventsfollowingimmunization.entity.AdverseEvents;
 import de.symeda.sormas.backend.adverseeventsfollowingimmunization.entity.Aefi;
 import de.symeda.sormas.backend.adverseeventsfollowingimmunization.entity.AefiInvestigation;
 import de.symeda.sormas.backend.docgeneration.DocumentTemplate;
@@ -75,9 +74,6 @@ public void testGetConfigFullyDefined() {
 		Environment.class,
 		EnvironmentSample.class,
 		SelfReport.class,
-		Aefi.class,
-		AdverseEvents.class,
-		AefiInvestigation.class,
 		DocumentTemplate.class,
 		Survey.class,
 		SurveyToken.class,