Shigellosis - Enhance Samples and Pathogen test form

[KarnaiahPesula]

Problem Description

After the Disease enum has been modified in (#13927) as part of epic (#13926), the case data form needs to be updated with Shigellosis -specific details

Added Value/Benefit

SORMAS will support Shigellosis disease case surveillance

Proposed Solution

• Configure the below samples for Shigellosis specific
  • Blood
  • Cerebrospinal fluid
  • Stools
  • Pus
  • Urine
  • Clinical sample
• Configure the below pathogen tests
  • Culture
  • Isolation
  • PCR
  • NAAT
  • Serogrouping
  • WGS
  • AST
• For AST pathogen test, it should display the details with MIC along with its interpretation fields and testing methods.
  • Antibiotic list
    • Ciprofloxacin
    • Azithromycin
    • Ceftriaxone
    • Ceftazidime
    • Cefotaxime
    • Ampicillin
    • Trimethoprim–sulfamethoxazole
  • MIC float value
  • Interpretation field
    • Susceptible
    • Intermediate
    • Resistant
    • Unknown
  • Testing methods,
    • Disk diffusion
    • MIC determination (E-test, broth microdilution)
    • WGS-based prediction
• For Serogrouping test, display the following groups
  • Species
    • Shigella boydii
    • Shigella dysenteriae
    • Shigella flexneri
    • Shigella sonnei
    • Shigella spp
    • Other
    • Unknown
  • Test method field
    • Agglutination
    • PCR-based
    • WGS-based
  • Serotype field.

Additional Information

No response