A generalist algorithm for nanocrystal segmentation in transmission electron microscopy (TEM) images (v1.0).
f1a4266a35059233e32482f13e6f85fe.mp4
Download the software from https://github.com/Sharpiless/Nanocrystals-TEM-segmentation/releases/tag/v2.2
通过网盘分享的文件：Sophon2.2.zip 链接: https://pan.baidu.com/s/19-7_h-9r-D7SPeH0SR2QOQ 提取码: 39nx --来自百度网盘超级会员v4的分享
The software has been heavily tested on Windows 10.
The software is built basically on Cellpose.
For basic usage, you can refer to Cellpose Docs.
We show the different parts in the following.
Our modified software support automatically calibrate the scale using modern OCR tools.
Or you can input manually in the text box. Press Enter after inputing.
Here is the calibration results (automatical):
We provide the checkpoints of a robust segmentation model (epoch28.pth).
Select the checkpoints and click [run].
Our software also supports exporting segmentation visualization and measurement data.
These results will be saved to the same folder with the input image.
The pixel-wise and real mesurements are saved to the ".csv" file:
Please refer to Training Installation for installation instructions.
First, add the model to GUI by clicking "Add custom torch model to GUI" in "Models".
Then, select the model by clicking "custom models" in "Other models".
