Merge pull request #62 from zivy/updateConfigFiles

Update the enviornment configuration files.

Author: zivy

.github/workflows/main.yml

@@ -76,7 +76,7 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         python -m pip install -r tests/requirements_testing.txt
-        jupyter nbextension enable --py --sys-prefix widgetsnbextension
+        jupyter server extension enable --py widgetsnbextension
     - name: Download data
       if: steps.cache.outputs.cache-hit != 'true'
       run: python downloaddata.py data/ data/manifest.json

environment.yml

@@ -4,10 +4,10 @@ channels:
   - conda-forge
 
 dependencies:
+  - python=3.13
   - pip
   - pip:
-    - python=3.13
-    - jupyter~=7.0
+    - notebook~=7.0
     - matplotlib
     - ipywidgets
     - numpy

environment_dev.yml

@@ -4,10 +4,10 @@ channels:
   - conda-forge
 
 dependencies:
+  - python=3.13
   - pip
   - pip:
-    - python=3.13
-    - jupyter~=7.0
+    - notebook~=7.0
     - matplotlib
     - ipywidgets
     - numpy

tests/requirements_testing.txt

@@ -1,13 +1,13 @@
-pytest
-markdown
-lxml
-pyenchant
-jupyter
+notebook~=7.0
 matplotlib
 ipywidgets
-itkwidgets
 numpy
 scipy
 pandas
 multiprocess
 SimpleITK>=2.2.0
+ipympl
+pytest
+markdown
+lxml
+pyenchant