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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -21,8 +21,8 @@ To pre-process and get the UNI features from the H&E slides you need access to U
2121To run an inference on the UNI features please follow the guide in the notebook: ` run_inference.ipynb `
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2323### 3. Training TLPath
24- To train TLPath please follow the notebook: ` train_TLPath.ipynb ` . TLPath can also be trained via CLI.
2524GTEx telomere data is publicly available and can be downloaded from: https://gtexportal.org/home/downloads/egtex/telomeres
25+ To train TLPath please follow the notebook: ` train_TLPath.ipynb ` . TLPath can also be trained via CLI.
2626` python /tlpath/model.py --telomere-file /path/to/telomere.csv --features_dir /path/to/features --output-dir /path/to/output --config /path/to/config.yaml --tissues-to-skip Tissue1 Tissue2 `
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2828- ` --telomere-file ` → Path to the telomere length data CSV file.
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