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[pre-commit.ci] auto fixes from pre-commit.com hooks
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1 parent 751e912 commit a041bc8

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Lines changed: 17 additions & 9 deletions

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tests/test_io/test_openephys.py

Lines changed: 17 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -38,7 +38,9 @@ def _assert_contact_ids_match_canonical_pattern(probe, label=""):
3838
### TESTS ###
3939
def test_NP2_OE_1_0():
4040
# NP2 1-shank
41-
probeA = read_openephys_neuropixels(data_path / "OE_1.0_Neuropix-PXI-multi-probe" / "settings.xml", probe_name="ProbeA")
41+
probeA = read_openephys_neuropixels(
42+
data_path / "OE_1.0_Neuropix-PXI-multi-probe" / "settings.xml", probe_name="ProbeA"
43+
)
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probe_dict = probeA.to_dict(array_as_list=True)
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validate_probe_dict(probe_dict)
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assert probeA.get_shank_count() == 1
@@ -101,7 +103,9 @@ def test_probe_part_number_mismatch_with_catalogue():
101103

102104
def test_NP1_subset():
103105
# NP1 - 200 channels selected by recording_state in Record Node
104-
probe_ap = read_openephys_neuropixels(data_path / "OE_Neuropix-PXI-subset" / "settings.xml", stream_name="ProbeA-AP")
106+
probe_ap = read_openephys_neuropixels(
107+
data_path / "OE_Neuropix-PXI-subset" / "settings.xml", stream_name="ProbeA-AP"
108+
)
105109
probe_dict = probe_ap.to_dict(array_as_list=True)
106110
validate_probe_dict(probe_dict)
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@@ -111,7 +115,9 @@ def test_NP1_subset():
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assert "adc_group" in probe_ap.contact_annotations
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assert "adc_sample_order" in probe_ap.contact_annotations
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114-
probe_lf = read_openephys_neuropixels(data_path / "OE_Neuropix-PXI-subset" / "settings.xml", stream_name="ProbeA-LFP")
118+
probe_lf = read_openephys_neuropixels(
119+
data_path / "OE_Neuropix-PXI-subset" / "settings.xml", stream_name="ProbeA-LFP"
120+
)
115121
probe_dict = probe_lf.to_dict(array_as_list=True)
116122
validate_probe_dict(probe_dict)
117123

@@ -492,7 +498,9 @@ def test_read_openephys_contact_ids_match_canonical_pattern():
492498
(see https://github.com/SpikeInterface/probeinterface/pull/383#discussion_r2650588006).
493499
"""
494500
# Path A (SELECTED_ELECTRODES): OE 1.0 dataset
495-
probe = read_openephys_neuropixels(data_path / "OE_1.0_Neuropix-PXI-multi-probe" / "settings.xml", probe_name="ProbeA")
501+
probe = read_openephys_neuropixels(
502+
data_path / "OE_1.0_Neuropix-PXI-multi-probe" / "settings.xml", probe_name="ProbeA"
503+
)
496504
_assert_contact_ids_match_canonical_pattern(probe, "OE_1.0 ProbeA")
497505

498506
# Path B (CHANNELS): NP2 dataset (single shank)
@@ -532,7 +540,9 @@ def test_read_openephys_contact_ids_match_canonical_pattern():
532540

533541
# QuadBase: NP2020 (4 probes)
534542
for i in range(4):
535-
probe = read_openephys_neuropixels(data_path / "OE_Neuropix-PXI-QuadBase" / "settings.xml", probe_name=f"ProbeC-{i+1}")
543+
probe = read_openephys_neuropixels(
544+
data_path / "OE_Neuropix-PXI-QuadBase" / "settings.xml", probe_name=f"ProbeC-{i+1}"
545+
)
536546
_assert_contact_ids_match_canonical_pattern(probe, f"QuadBase ProbeC-{i+1}")
537547

538548

@@ -731,8 +741,7 @@ def test_has_neuropixels_probes_negative(tmp_path):
731741
# A settings.xml with only a non-Neuropixels processor (e.g. Rhythm FPGA / Intan)
732742
# must return False. This is the routing case that motivates the helper.
733743
settings = tmp_path / "settings.xml"
734-
settings.write_text(
735-
"""<?xml version="1.0"?>
744+
settings.write_text("""<?xml version="1.0"?>
736745
<SETTINGS>
737746
<INFO><VERSION>0.6.0</VERSION></INFO>
738747
<SIGNALCHAIN>
@@ -741,8 +750,7 @@ def test_has_neuropixels_probes_negative(tmp_path):
741750
</PROCESSOR>
742751
</SIGNALCHAIN>
743752
</SETTINGS>
744-
"""
745-
)
753+
""")
746754
assert has_neuropixels_probes(settings) is False
747755

748756

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