Update cruft with batchpr

Author: Cadair

.cruft.json

@@ -1,6 +1,6 @@
 {
   "template": "https://github.com/sunpy/package-template",
-  "commit": "4268346dead7b529a3d53df19bcf374bb2bbef34",
+  "commit": "fc4712d01764ac8bbe4b300dc754b3272449cff4",
   "checkout": null,
   "context": {
     "cookiecutter": {
@@ -32,7 +32,7 @@
         ".github/workflows/sub_package_update.yml"
       ],
       "_template": "https://github.com/sunpy/package-template",
-      "_commit": "4268346dead7b529a3d53df19bcf374bb2bbef34"
+      "_commit": "fc4712d01764ac8bbe4b300dc754b3272449cff4"
     }
   },
   "directory": null

.github/workflows/ci.yml

@@ -20,9 +20,11 @@ concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}
   cancel-in-progress: true
 
+permissions: {}
+
 jobs:
   core:
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       submodules: false
       coverage: codecov
@@ -35,8 +37,10 @@ jobs:
   sdist_verify:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
-      - uses: actions/setup-python@v6
+      - uses: actions/checkout@v6  # zizmor: ignore[unpinned-uses]
+        with:
+          persist-credentials: false
+      - uses: actions/setup-python@v6  # zizmor: ignore[unpinned-uses]
         with:
           python-version: '3.13'
       - run: python -m pip install -U --user build
@@ -46,7 +50,7 @@ jobs:
 
   test:
     needs: [core, sdist_verify]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       submodules: false
       coverage: codecov
@@ -63,7 +67,7 @@ jobs:
 
   docs:
     needs: [core]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       default_python: '3.13'
       submodules: false
@@ -98,7 +102,7 @@ jobs:
     secrets:
       CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
-  publish:
+  build_dists:
     # Build wheels on PRs only when labelled. Releases will only be published if tagged ^v.*
     # see https://github-actions-workflows.openastronomy.org/en/latest/publish.html#upload-to-pypi
     if: |
@@ -108,12 +112,13 @@ jobs:
         contains(github.event.pull_request.labels.*.name, 'Run publish')
       )
     needs: [test, docs]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/publish_pure_python.yml@v2
+    uses: OpenAstronomy/github-actions-workflows/.github/workflows/publish_pure_python.yml@v2  # zizmor: ignore[unpinned-uses]
     with:
       python-version: '3.13'
       test_extras: 'all,tests'
       test_command: 'pytest -p no:warnings --doctest-rst --pyargs ndcube'
       submodules: false
+<<<<<<<
     secrets:
       pypi_token: ${{ secrets.pypi_token }}
 
@@ -129,3 +134,29 @@ jobs:
           homeserver: ${{ secrets.matrix_homeserver }}
           roomid: '!TWSJXVpyflnZOzmSQz:matrix.org'
           ignore_pattern: '.*Load tox.*'
+=======
+      save_artifacts: true
+      upload_to_pypi: false
+
+  publish:
+    if: startsWith(github.ref, 'refs/tags/v')
+    name: Upload to PyPI
+    runs-on: ubuntu-latest
+    needs: [build_dists]
+    permissions:
+      id-token: write
+    environment:
+      name: pypi
+    steps:
+      - name: Download artifacts
+        uses: actions/download-artifact@v7  # zizmor: ignore[unpinned-uses]
+        with:
+          merge-multiple: true
+          pattern: dist-*
+          path: dist
+
+      - run: ls -lha dist/
+
+      - name: Run upload
+        uses: pypa/gh-action-pypi-publish@v1  # zizmor: ignore[unpinned-uses]
+>>>>>>>

.github/workflows/sub_package_update.yml

@@ -13,18 +13,20 @@ on:
     #        │ │ │ │ ┌───────── day of the week (0 - 6 or SUN-SAT)
     - cron: '0 7 * * 1'  # Every Monday at 7am UTC
 
+permissions: {}
+
 jobs:
   update:
     runs-on: ubuntu-latest
     permissions:
       contents: write
       pull-requests: write
-    strategy:
-      fail-fast: true
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v6  # zizmor: ignore[unpinned-uses]
+        with:
+          persist-credentials: false
 
-      - uses: actions/setup-python@v6
+      - uses: actions/setup-python@v6  # zizmor: ignore[unpinned-uses]
         with:
           python-version: "3.14"
 
@@ -50,8 +52,8 @@ jobs:
         id: cruft_update
         if: steps.check.outputs.has_changes == '1'
         run: |
-          git config --global user.email "${{ github.actor }}@users.noreply.github.com"
-          git config --global user.name "${{ github.actor }}"
+          git config --global user.email "${GITHUB_ACTOR}@users.noreply.github.com"
+          git config --global user.name "${GITHUB_ACTOR}"
 
           cruft_output=$(cruft update --skip-apply-ask --refresh-private-variables)
           echo $cruft_output
@@ -77,7 +79,7 @@ jobs:
 
       - name: Create pull request
         if: steps.cruft_json.outputs.has_changes == '1'
-        uses: peter-evans/create-pull-request@v8
+        uses: peter-evans/create-pull-request@v8  # zizmor: ignore[unpinned-uses]
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
           add-paths: "."
@@ -103,7 +105,7 @@ jobs:
       issues: write
     steps:
       - name: Open an issue if workflow fails
-        uses: actions/github-script@v7
+        uses: actions/github-script@v7  # zizmor: ignore[unpinned-uses]
         with:
           github-token: ${{ github.token }}
           # This script is adapted from https://github.com/scientific-python/issue-from-pytest-log-action
@@ -151,7 +153,7 @@ jobs:
                 repo: variables.name,
                 body: issue_body,
                 title: variables.title,
-                labels: [variables.label],
+                labels: [variables.label, "pre-commit.ci autofix"],
               });
             } else {
               await github.rest.issues.update({

.pre-commit-config.yaml

@@ -1,35 +1,56 @@
 repos:
+  - repo: https://github.com/zizmorcore/zizmor-pre-commit
+    rev: v1.23.1
+    hooks:
+      - id: zizmor
     # This should be before any formatting hooks like isort
   - repo: https://github.com/astral-sh/ruff-pre-commit
     rev: "v0.15.4"
     hooks:
       - id: ruff
         args: ["--fix"]
+        types: [python]
+        # Define here once and then reference using YAML anchor
+        exclude: &exclude_dirs ^ndcube/(data|extern)/
   - repo: https://github.com/PyCQA/isort
     rev: 8.0.1
     hooks:
       - id: isort
-        exclude: ".*(.fits|.fts|.fit|.header|.txt|tca.*|extern.*|ndcube/extern)$"
+        types: [python]
+        exclude: *exclude_dirs
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v6.0.0
     hooks:
       - id: check-ast
+        types: [python]
+        exclude: *exclude_dirs
       - id: check-case-conflict
+        types: [python]
+        exclude: *exclude_dirs
       - id: trailing-whitespace
-        exclude: ".*(.fits|.fts|.fit|.header|.txt)$"
+        types_or: [python, rst]
       - id: check-yaml
+        types: [yaml]
+        exclude: *exclude_dirs
+      - id: check-toml
+        types: [toml]
+        exclude: *exclude_dirs
       - id: debug-statements
+        types: [python]
+        exclude: *exclude_dirs
       - id: check-added-large-files
         args: ["--enforce-all", "--maxkb=1054"]
       - id: end-of-file-fixer
-        exclude: ".*(.fits|.fts|.fit|.header|.txt|tca.*|.json)$|^CITATION.rst$"
+        types_or: [python, rst]
       - id: mixed-line-ending
-        exclude: ".*(.fits|.fts|.fit|.header|.txt|tca.*)$"
+        types_or: [python, rst]
   - repo: https://github.com/codespell-project/codespell
     rev: v2.4.1
     hooks:
       - id: codespell
         args: [ "--write-changes" ]
+        types_or: [python, rst]
+        exclude: *exclude_dirs
 ci:
   autofix_prs: false
   autoupdate_schedule: "quarterly"

README.rst

@@ -1,11 +1,43 @@
+<<<<<<<
 ndcube
 ======
 
+=======
+A package for multi-dimensional contiguous and non-contiguous coordinate aware arrays.
+======================================================================================
+
+Usage of Generative AI
+----------------------
+>>>>>>>
 |Latest Version| |codecov| |matrix| |Powered by NumFOCUS| |Powered by SunPy|
 
 .. |Latest Version| image:: https://img.shields.io/pypi/v/ndcube.svg
    :target: https://pypi.python.org/pypi/ndcube/
    :alt: It is up to date, we promise
+<<<<<<<
+=======
+If you use generative AI tools as an aid in developing code or documentation changes, ensure that you fully understand the proposed changes and can explain why they are the correct approach and an improvement to the current state.
+For more information see our documentation on fair and appropriate `AI usage <https://docs.sunpy.org/en/latest/dev_guide/contents/ai_usage.html>`__.
+
+Contributing
+------------
+
+We love contributions! ndcube is open source,
+built on open source, and we'd love to have you hang out in our community.
+
+If you would like to get involved, check out the `Developers Guide`_ section of the SunPy docs.
+Stop by our chat room `#sunpy:openastronomy.org`_ if you have any questions.
+Help is always welcome so let us know what you like to work on, or check out the `issues page`_ for the list of known outstanding items.
+
+For more information on contributing to SunPy, please read our `Newcomers' guide`_.
+
+.. _Developers Guide: https://docs.sunpy.org/en/latest/dev_guide/index.html
+.. _`#sunpy:openastronomy.org`: https://app.element.io/#/room/#sunpy:openastronomy.org
+.. _issues page: https://github.com/sunpy/ndcube/issues
+.. _Newcomers' guide: https://docs.sunpy.org/en/latest/dev_guide/contents/newcomers.html
+
+When you are interacting with the SunPy community you are asked at to follow our `code of conduct <https://sunpy.org/coc>`__.
+>>>>>>>
 .. |matrix| image:: https://img.shields.io/matrix/ndcube:openastronomy.org.svg?colorB=%23FE7900&label=Chat&logo=matrix&server_fqdn=openastronomy.modular.im
    :target: https://app.element.io/#/room/#ndcube:openastronomy.org
    :alt: join us on #ndcube:openastronom.org on matrix