TRON-Bioinformatics
diff --git a/‎fastqs/SRR1659960_05pc_R1.fastq.gz‎
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diff --git a/‎fastqs/SRR1659960_05pc_R2.fastq.gz‎
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diff --git a/‎model/Fusion_modeling_FFPE_train_v39.random_forest.model_full_data.EF_full.rds‎
695 KB b/‎model/Fusion_modeling_FFPE_train_v39.random_forest.model_full_data.EF_full.rds‎
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diff --git a/‎ref/Homo_sapiens.GRCh38.110.chr22.gff3‎
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diff --git a/‎ref/Homo_sapiens.GRCh38.110.chr22.gff3.db‎
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diff --git a/‎ref/Homo_sapiens.GRCh38.110.chr22.gtf‎
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diff --git a/‎ref/Homo_sapiens.GRCh38.110.gtf.tsl‎
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+transcript_id	trans_biotype	gene_biotype	tsl
+ENST00000624431	unprocessed_pseudogene	unprocessed_pseudogene	NA
+ENST00000424215	lncRNA	lncRNA	5
+ENST00000511072	protein_coding	protein_coding	5
+ENST00000607632	retained_intron	protein_coding	2
+ENST00000378391	protein_coding	protein_coding	1
+ENST00000514189	protein_coding	protein_coding	5
+ENST00000270722	protein_coding	protein_coding	1 (assigned to previous version 9)
+ENST00000512462	protein_coding_CDS_not_defined	protein_coding	1
+ENST00000463591	protein_coding	protein_coding	5
+ENST00000509860	protein_coding	protein_coding	5
+ENST00000378389	protein_coding_CDS_not_defined	protein_coding	5
+ENST00000606170	retained_intron	protein_coding	4
+ENST00000641871	lncRNA	lncRNA	NA
+ENST00000288774	protein_coding	protein_coding	1 (assigned to previous version 7)
+ENST00000447513	protein_coding	protein_coding	1 (assigned to previous version 6)
+ENST00000650293	nonsense_mediated_decay	protein_coding	NA
+ENST00000507596	protein_coding	protein_coding	5
+ENST00000510434	nonsense_mediated_decay	protein_coding	3
+ENST00000508384	protein_coding	protein_coding	3
+ENST00000515760	protein_coding_CDS_not_defined	protein_coding	4