Skip to content

Rethinking SMC #2789

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
charlesknipp wants to merge 13 commits into
base: main
Choose a base branch
from
+594 −40
Draft

Rethinking SMC #2789

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
13 commits
Select commit Hold shift + click to select a range
d0edd81
first pass at the SMC iterface
charlesknipp Mar 13, 2026
5ca3c31
ensure precompilation
charlesknipp Mar 13, 2026
9747f46
formatter
charlesknipp Mar 13, 2026
f1ec36c
add forgotten import
charlesknipp Mar 18, 2026
753c0ad
more imports necessary
charlesknipp Mar 18, 2026
f1b7826
formatter
charlesknipp Mar 18, 2026
beec574
properly treat `bundle_samples`
charlesknipp Mar 18, 2026
f7c2c3e
update some of the original unit tests
charlesknipp Mar 18, 2026
00516ab
formatter
charlesknipp Mar 18, 2026
80bfac8
convenience constructor
charlesknipp Mar 18, 2026
3abcc86
Merge remote-tracking branch 'origin/main' into ck/smc
charlesknipp Apr 23, 2026
dc656ba
migrate new interface changes (broken)
charlesknipp Apr 23, 2026
5d09291
update unit tests
charlesknipp Apr 23, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 2 additions & 0 deletions Project.toml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,7 @@ OptimizationOptimJL = "36348300-93cb-4f02-beb5-3c3902f8871e"
OrderedCollections = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
Random123 = "74087812-796a-5b5d-8853-05524746bad3"
Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"
Expand Down Expand Up @@ -73,6 +74,7 @@ OptimizationOptimJL = "0.1 - 0.4"
OrderedCollections = "1"
Printf = "1"
Random = "1"
Random123 = "1.7.1"
Reexport = "0.2, 1"
SciMLBase = "2"
SpecialFunctions = "0.7.2, 0.8, 0.9, 0.10, 1, 2"
Expand Down
1 change: 0 additions & 1 deletion src/Turing.jl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -120,7 +120,6 @@ export
NUTS,
SMC,
PG,
CSMC,
RepeatSampler,
externalsampler,
# Variational inference - AdvancedVI
Expand Down
5 changes: 3 additions & 2 deletions src/mcmc/Inference.jl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -23,6 +23,7 @@ using Random: AbstractRNG
using AbstractMCMC: AbstractModel, AbstractSampler
using DocStringExtensions: FIELDS, TYPEDEF, TYPEDFIELDS
using DataStructures: OrderedSet, OrderedDict
using StatsBase

import ADTypes
import AbstractMCMC
Expand All @@ -35,6 +36,7 @@ import AdvancedPS
import EllipticalSliceSampling
import LogDensityProblems
import Random
import Random123
import MCMCChains
import StatsBase: predict

Expand All @@ -54,7 +56,6 @@ export Hamiltonian,
HMCDA,
NUTS,
SMC,
CSMC,
PG,
RepeatSampler,
Prior,
Expand Down Expand Up @@ -96,7 +97,7 @@ include("ess.jl")
include("hmc.jl")
include("mh.jl")
include("is.jl")
include("particle_mcmc.jl")
include("smc.jl")
include("sghmc.jl")
include("emcee.jl")
include("prior.jl")
Expand Down
Loading
Loading