diff --git a/.gitignore b/.gitignore
index 3ea06a635..56ce45ee8 100644
--- a/.gitignore
+++ b/.gitignore
@@ -9,7 +9,8 @@ bundle.js
 npm-debug.log
 /.test/
 /test/execution-tests/**/typings
-!/test/**/expectedOutput-*/**
+!/test/**/expectedOutput/**
+!/test/**/expectedOutput-transpile/**
 /**/node_modules
 /dist
 /test/execution-tests/**/dist
diff --git a/.vscode/settings.json b/.vscode/settings.json
index d9368803c..39f6e7625 100644
--- a/.vscode/settings.json
+++ b/.vscode/settings.json
@@ -5,6 +5,7 @@
   "github.copilot.nextEditSuggestions.enabled": true,
   "chat.tools.terminal.autoApprove": {
     "git blame": true,
-    "sed": true
+    "sed": true,
+    "yarn": true,
   }
 }
diff --git a/AGENTS.md b/AGENTS.md
index 03e7db858..4695b73cc 100644
--- a/AGENTS.md
+++ b/AGENTS.md
@@ -41,20 +41,6 @@ yarn comparison-tests -- --save-output --single-test <name>       # regenerate o
 
 > Note: test name casing must be exact when using `--single-test`.
 
-### Seeding snapshots for a new TypeScript version
-
-When adding support for a new TypeScript version, run:
-
-```bash
-yarn comparison-tests-generate
-```
-
-This does two things:
-1. `git clean -xfd test/comparison-tests` — wipes all untracked/generated files in the test directory.
-2. Runs `test/comparison-tests/stub-new-version.js`, which copies every `expectedOutput-{OLD}/` and `expectedOutput-transpile-{OLD}/` folder to the corresponding `expectedOutput-{NEW}/` counterpart across all test sub-directories.
-
-The `OLD_VERSION` and `NEW_VERSION` constants at the top of `stub-new-version.js` must be updated manually before running this script each time a new TypeScript version is introduced. After running, review and commit the seeded snapshots, then use `--save-output` to correct any that differ from the new version's actual output.
-
 ## Execution tests (`test/execution-tests/`)
 
 Each sub-directory is a mini webpack project with a Karma/Jasmine test suite. The harness compiles the project and **runs the compiled code** — useful for asserting correct runtime behaviour. These are matrix-tested in CI across Node 20/22 and TypeScript 5.x versions.
diff --git a/package.json b/package.json
index 7a4080408..444c7d177 100644
--- a/package.json
+++ b/package.json
@@ -8,7 +8,6 @@
     "build": "tsc --version && tsc --project \"./src\"",
     "lint": "tsc --project \"./src\" --noEmit && eslint -c .eslintrc.js --ext .ts ./src",
     "comparison-tests": "git clean -xfd test/comparison-tests && npm link --legacy-peer-deps ./test/comparison-tests/testLib && node test/comparison-tests/run-tests.js",
-    "comparison-tests-generate": "git clean -xfd test/comparison-tests && node test/comparison-tests/stub-new-version.js",
     "execution-tests": "git clean -xfd test/execution-tests && node test/execution-tests/run-tests.js",
     "test": "git clean -xfd test/comparison-tests && git clean -xfd test/execution-tests && node test/run-tests.js",
     "clean": "git clean -xfd test/comparison-tests && git clean -xfd test/execution-tests",
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-6.0/bundle.js b/test/comparison-tests/aliasResolution/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/aliasResolution/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/aliasResolution/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/aliasResolution/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-6.0/patch0/bundle.js b/test/comparison-tests/aliasResolution/expectedOutput-transpile/patch0/bundle.js
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-6.0/patch0/bundle.js
rename to test/comparison-tests/aliasResolution/expectedOutput-transpile/patch0/bundle.js
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/patch0/output.txt b/test/comparison-tests/aliasResolution/expectedOutput-transpile/patch0/output.txt
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/patch0/output.txt
rename to test/comparison-tests/aliasResolution/expectedOutput-transpile/patch0/output.txt
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/aliasResolution/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/aliasResolution/expectedOutput/bundle.js
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-6.0/output.txt b/test/comparison-tests/aliasResolution/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-6.0/output.txt
rename to test/comparison-tests/aliasResolution/expectedOutput/output.txt
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/patch0/bundle.js b/test/comparison-tests/aliasResolution/expectedOutput/patch0/bundle.js
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-transpile-6.0/patch0/bundle.js
rename to test/comparison-tests/aliasResolution/expectedOutput/patch0/bundle.js
diff --git a/test/comparison-tests/aliasResolution/expectedOutput-6.0/patch0/output.txt b/test/comparison-tests/aliasResolution/expectedOutput/patch0/output.txt
similarity index 100%
rename from test/comparison-tests/aliasResolution/expectedOutput-6.0/patch0/output.txt
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similarity index 100%
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rename from test/comparison-tests/conditionalRequire/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/conditionalRequire/expectedOutput/bundle.js
diff --git a/test/comparison-tests/conditionalRequire/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/conditionalRequire/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/conditionalRequire/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/conditionalRequire/expectedOutput/output.txt
diff --git a/test/comparison-tests/create-and-execute-test.js b/test/comparison-tests/create-and-execute-test.js
index 62afb0529..ce24153ec 100644
--- a/test/comparison-tests/create-and-execute-test.js
+++ b/test/comparison-tests/create-and-execute-test.js
@@ -29,7 +29,6 @@ if (saveOutputMode) {
     console.log('Will save output as --save-output was supplied...');
 }
 
-const typescriptVersion = semver.major(typescript.version) + '.' + semver.minor(typescript.version);
 const FLAKY = '_FLAKY_';
 const IGNORE = '_IGNORE_';
 
@@ -144,12 +143,12 @@ function createPaths(stagingPath, test, options) {
     const testStagingPath = path.join(stagingPath, test + (options.transpileOnly ? '.transpile' : ''));
     rimraf.sync(testStagingPath); // Make sure it's clean
 
-    const transpilePath = options.transpileOnly ? 'transpile-' : '';
+    const transpilePath = options.transpileOnly ? 'expectedOutput-transpile' : 'expectedOutput';
     return {
         testStagingPath: testStagingPath,
         actualOutput: path.join(testStagingPath, 'actualOutput'),
-        expectedOutput: path.join(testStagingPath, 'expectedOutput-' + transpilePath + typescriptVersion),
-        originalExpectedOutput: path.join(testPath, 'expectedOutput-' + transpilePath + typescriptVersion),
+        expectedOutput: path.join(testStagingPath, transpilePath),
+        originalExpectedOutput: path.join(testPath, transpilePath),
         outputPath: testStagingPath,
     };
 }
@@ -213,11 +212,11 @@ function createWebpackWatchHandler(done, paths, testState, options, test) {
 function setPathsAndGetPatch(paths, testState, options) {
     let patch = '';
     if (testState.iteration > 0) {
-        const transpilePath = options.transpileOnly ? 'transpile-' : '';
+        const transpilePath = options.transpileOnly ? 'expectedOutput-transpile' : 'expectedOutput';
         patch = 'patch' + (testState.iteration - 1);
         paths.actualOutput = path.join(paths.testStagingPath, 'actualOutput', patch);
-        paths.expectedOutput = path.join(paths.testStagingPath, 'expectedOutput-' + transpilePath + typescriptVersion, patch);
-        paths.originalExpectedOutput = path.join(testPath, 'expectedOutput-' + transpilePath + typescriptVersion, patch)
+        paths.expectedOutput = path.join(paths.testStagingPath, transpilePath, patch);
+        paths.originalExpectedOutput = path.join(testPath, transpilePath, patch);
         mkdirp.sync(paths.actualOutput);
         mkdirp.sync(paths.expectedOutput);
         if (saveOutputMode) mkdirp.sync(paths.originalExpectedOutput);
diff --git a/test/comparison-tests/customTransformer/expectedOutput-6.0/bundle.js b/test/comparison-tests/customTransformer/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/customTransformer/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/customTransformer/expectedOutput-6.0/output.txt b/test/comparison-tests/customTransformer/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-6.0/output.txt
rename to test/comparison-tests/customTransformer/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/customTransformer/expectedOutput-6.0/patch0/bundle.js b/test/comparison-tests/customTransformer/expectedOutput-transpile/patch0/bundle.js
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-6.0/patch0/bundle.js
rename to test/comparison-tests/customTransformer/expectedOutput-transpile/patch0/bundle.js
diff --git a/test/comparison-tests/customTransformer/expectedOutput-6.0/patch0/output.txt b/test/comparison-tests/customTransformer/expectedOutput-transpile/patch0/output.txt
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-6.0/patch0/output.txt
rename to test/comparison-tests/customTransformer/expectedOutput-transpile/patch0/output.txt
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similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-6.0/patch1/bundle.js
rename to test/comparison-tests/customTransformer/expectedOutput-transpile/patch1/bundle.js
diff --git a/test/comparison-tests/customTransformer/expectedOutput-6.0/patch1/output.txt b/test/comparison-tests/customTransformer/expectedOutput-transpile/patch1/output.txt
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-6.0/patch1/output.txt
rename to test/comparison-tests/customTransformer/expectedOutput-transpile/patch1/output.txt
diff --git a/test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/customTransformer/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/customTransformer/expectedOutput/bundle.js
diff --git a/test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/customTransformer/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/customTransformer/expectedOutput/output.txt
diff --git a/test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch0/bundle.js b/test/comparison-tests/customTransformer/expectedOutput/patch0/bundle.js
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch0/bundle.js
rename to test/comparison-tests/customTransformer/expectedOutput/patch0/bundle.js
diff --git a/test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch0/output.txt b/test/comparison-tests/customTransformer/expectedOutput/patch0/output.txt
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch0/output.txt
rename to test/comparison-tests/customTransformer/expectedOutput/patch0/output.txt
diff --git a/test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch1/bundle.js b/test/comparison-tests/customTransformer/expectedOutput/patch1/bundle.js
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch1/bundle.js
rename to test/comparison-tests/customTransformer/expectedOutput/patch1/bundle.js
diff --git a/test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch1/output.txt b/test/comparison-tests/customTransformer/expectedOutput/patch1/output.txt
similarity index 100%
rename from test/comparison-tests/customTransformer/expectedOutput-transpile-6.0/patch1/output.txt
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similarity index 100%
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similarity index 100%
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similarity index 100%
rename from test/comparison-tests/customTransformerUsingPathString/expectedOutput-6.0/patch0/bundle.js
rename to test/comparison-tests/customTransformerUsingPathString/expectedOutput-transpile/patch0/bundle.js
diff --git a/test/comparison-tests/customTransformerUsingPathString/expectedOutput-6.0/patch0/output.txt b/test/comparison-tests/customTransformerUsingPathString/expectedOutput-transpile/patch0/output.txt
similarity index 100%
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similarity index 100%
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similarity index 100%
rename from test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch0/bundle.js
rename to test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch0/bundle.js
diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch0/lib/index.d.ts b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch0/lib/index.d.ts
similarity index 100%
rename from test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch0/lib/index.d.ts
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch0/lib/index.js b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch0/lib/index.js
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch0/lib/tsconfig.tsbuildinfo b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch0/lib/tsconfig.tsbuildinfo
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch1/bundle.js b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch1/bundle.js
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch3/bundle.js b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch3/bundle.js
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rename from test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch3/bundle.js
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch3/lib/index.d.ts b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch3/lib/index.d.ts
similarity index 100%
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch3/lib/index.js b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch3/lib/index.js
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch3/lib/index.js.map b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch3/lib/index.js.map
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-transpile-6.0/patch3/lib/tsconfig.tsbuildinfo b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch3/lib/tsconfig.tsbuildinfo
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diff --git a/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput-6.0/patch3/output.txt b/test/comparison-tests/projectReferencesWatch_WatchApi/expectedOutput/patch3/output.txt
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/bundle.js b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile/bundle.js
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rename from test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/bundle.js
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/lib/index.d.ts b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile/lib/index.d.ts
similarity index 100%
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/lib/index.js b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile/lib/index.js
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/lib/index.js.map b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile/lib/index.js.map
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/lib/tsconfig.tsbuildinfo b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile/lib/tsconfig.tsbuildinfo
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-6.0/output.txt b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile/output.txt
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile-6.0/lib/index.d.ts b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput/lib/index.d.ts
similarity index 100%
rename from test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile-6.0/lib/index.d.ts
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile-6.0/lib/index.js b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput/lib/index.js
similarity index 100%
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile-6.0/lib/index.js.map b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput/lib/index.js.map
similarity index 100%
rename from test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile-6.0/lib/index.js.map
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diff --git a/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput-transpile-6.0/lib/tsconfig.tsbuildinfo b/test/comparison-tests/projectReferencesWithCustomTransformer/expectedOutput/lib/tsconfig.tsbuildinfo
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similarity index 100%
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diff --git a/test/comparison-tests/replacement/expectedOutput-6.0/output.txt b/test/comparison-tests/replacement/expectedOutput-transpile/output.txt
similarity index 100%
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similarity index 100%
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similarity index 100%
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diff --git a/test/comparison-tests/reportFiles/expectedOutput-6.0/bundle.js b/test/comparison-tests/reportFiles/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/reportFiles/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/reportFiles/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/reportFiles/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/reportFiles/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/reportFiles/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/reportFiles/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/reportFiles/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/reportFiles/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/reportFiles/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/reportFiles/expectedOutput/bundle.js
diff --git a/test/comparison-tests/reportFiles/expectedOutput-6.0/output.txt b/test/comparison-tests/reportFiles/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/reportFiles/expectedOutput-6.0/output.txt
rename to test/comparison-tests/reportFiles/expectedOutput/output.txt
diff --git a/test/comparison-tests/resolveJsonModule/expectedOutput-6.0/bundle.js b/test/comparison-tests/resolveJsonModule/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/resolveJsonModule/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/resolveJsonModule/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/resolveJsonModule/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/resolveJsonModule/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/resolveJsonModule/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/resolveJsonModule/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/resolveJsonModule/expectedOutput-6.0/app.d.ts b/test/comparison-tests/resolveJsonModule/expectedOutput/app.d.ts
similarity index 100%
rename from test/comparison-tests/resolveJsonModule/expectedOutput-6.0/app.d.ts
rename to test/comparison-tests/resolveJsonModule/expectedOutput/app.d.ts
diff --git a/test/comparison-tests/resolveJsonModule/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/resolveJsonModule/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/resolveJsonModule/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/resolveJsonModule/expectedOutput/bundle.js
diff --git a/test/comparison-tests/resolveJsonModule/expectedOutput-6.0/output.txt b/test/comparison-tests/resolveJsonModule/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/resolveJsonModule/expectedOutput-6.0/output.txt
rename to test/comparison-tests/resolveJsonModule/expectedOutput/output.txt
diff --git a/test/comparison-tests/run-tests.js b/test/comparison-tests/run-tests.js
index 8d261cd31..9e60604b9 100644
--- a/test/comparison-tests/run-tests.js
+++ b/test/comparison-tests/run-tests.js
@@ -46,10 +46,26 @@ let failingTests = [];
 
 // set up new empty staging area
 const stagingPath = path.resolve(__dirname, '../../.test');
-rimraf.sync(stagingPath);
+removeStagingPath(stagingPath);
 
 runTests();
 
+function removeStagingPath(folderPath) {
+  const maxAttempts = 5;
+  let attempt = 0;
+  while (++attempt <= maxAttempts) {
+    try {
+      rimraf.sync(folderPath);
+      return;
+    } catch (error) {
+      if (error && error.code === 'ENOTEMPTY' && attempt < maxAttempts) {
+        continue;
+      }
+      throw error;
+    }
+  }
+}
+
 // --------------------------------------------------------------
 
 function runTests() {
diff --git a/test/comparison-tests/simpleDependency/expectedOutput-6.0/bundle.js b/test/comparison-tests/simpleDependency/expectedOutput-transpile/bundle.js
similarity index 100%
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diff --git a/test/comparison-tests/simpleDependency/expectedOutput-6.0/patch1/bundle.js b/test/comparison-tests/simpleDependency/expectedOutput-transpile/patch1/bundle.js
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rename from test/comparison-tests/simpleDependency/expectedOutput-transpile-6.0/patch1/bundle.js
rename to test/comparison-tests/simpleDependency/expectedOutput/patch1/bundle.js
diff --git a/test/comparison-tests/simpleDependency/expectedOutput-6.0/patch1/output.txt b/test/comparison-tests/simpleDependency/expectedOutput/patch1/output.txt
similarity index 100%
rename from test/comparison-tests/simpleDependency/expectedOutput-6.0/patch1/output.txt
rename to test/comparison-tests/simpleDependency/expectedOutput/patch1/output.txt
diff --git a/test/comparison-tests/sourceMaps/expectedOutput-6.0/bundle.js b/test/comparison-tests/sourceMaps/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/sourceMaps/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/sourceMaps/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/sourceMaps/expectedOutput-6.0/bundle.js.map b/test/comparison-tests/sourceMaps/expectedOutput-transpile/bundle.js.map
similarity index 100%
rename from test/comparison-tests/sourceMaps/expectedOutput-6.0/bundle.js.map
rename to test/comparison-tests/sourceMaps/expectedOutput-transpile/bundle.js.map
diff --git a/test/comparison-tests/sourceMaps/expectedOutput-6.0/output.txt b/test/comparison-tests/sourceMaps/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/sourceMaps/expectedOutput-6.0/output.txt
rename to test/comparison-tests/sourceMaps/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/sourceMaps/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/sourceMaps/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/sourceMaps/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/sourceMaps/expectedOutput/bundle.js
diff --git a/test/comparison-tests/sourceMaps/expectedOutput-transpile-6.0/bundle.js.map b/test/comparison-tests/sourceMaps/expectedOutput/bundle.js.map
similarity index 100%
rename from test/comparison-tests/sourceMaps/expectedOutput-transpile-6.0/bundle.js.map
rename to test/comparison-tests/sourceMaps/expectedOutput/bundle.js.map
diff --git a/test/comparison-tests/sourceMaps/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/sourceMaps/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/sourceMaps/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/sourceMaps/expectedOutput/output.txt
diff --git a/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile-6.0/bundle.js.map b/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile/bundle.js.map
similarity index 100%
rename from test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile-6.0/bundle.js.map
rename to test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile/bundle.js.map
diff --git a/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-6.0/bundle.js b/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput/bundle.js
diff --git a/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-6.0/bundle.js.map b/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput/bundle.js.map
similarity index 100%
rename from test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-6.0/bundle.js.map
rename to test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput/bundle.js.map
diff --git a/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-6.0/output.txt b/test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput-6.0/output.txt
rename to test/comparison-tests/sourceMapsShouldConsiderInputSourceMap/expectedOutput/output.txt
diff --git a/test/comparison-tests/stub-new-version.js b/test/comparison-tests/stub-new-version.js
deleted file mode 100644
index d01622fae..000000000
--- a/test/comparison-tests/stub-new-version.js
+++ /dev/null
@@ -1,42 +0,0 @@
-// @ts-check
-const fs = require('fs-extra');
-const path = require('path');
-const mkdirp = require('mkdirp');
-const copySync = require('./copySync');
-
-// BASH script to delete old test output
-// find ./test/comparison-tests -type d -name '*expectedOutput*5.9' -print0 | xargs -0 -I {} /bin/rm -rf "{}"
-
-// update this manually when a new version comes out
-const OLD_VERSION = '5.9';
-const NEW_VERSION = '6.0';
-
-fs.readdirSync(__dirname).forEach(function(test) {
-  const testPath = path.join(__dirname, test);
-  if (fs.statSync(testPath).isDirectory()) {
-    if (test === 'testLib') return;
-
-    const expectedOutput = path.join(testPath, `expectedOutput-${OLD_VERSION}`);
-    const newExpectedOutput = path.join(
-      testPath,
-      `expectedOutput-${NEW_VERSION}`
-    );
-
-    mkdirp.sync(newExpectedOutput);
-    copySync(expectedOutput, newExpectedOutput);
-
-    const expectedTranspileOutput = path.join(
-      testPath,
-      `expectedOutput-transpile-${OLD_VERSION}`
-    );
-    const newExpectedTranspileOutput = path.join(
-      testPath,
-      `expectedOutput-transpile-${NEW_VERSION}`
-    );
-
-    if (fs.existsSync(expectedTranspileOutput)) {
-      mkdirp.sync(newExpectedTranspileOutput);
-      copySync(expectedTranspileOutput, newExpectedTranspileOutput);
-    }
-  }
-});
diff --git a/test/comparison-tests/tsconfigInvalid/expectedOutput-6.0/bundle.js b/test/comparison-tests/tsconfigInvalid/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/tsconfigInvalid/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/tsconfigInvalid/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/tsconfigInvalid/expectedOutput-6.0/output.txt b/test/comparison-tests/tsconfigInvalid/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/tsconfigInvalid/expectedOutput-6.0/output.txt
rename to test/comparison-tests/tsconfigInvalid/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/tsconfigInvalid/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/tsconfigInvalid/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/tsconfigInvalid/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/tsconfigInvalid/expectedOutput/bundle.js
diff --git a/test/comparison-tests/tsconfigInvalid/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/tsconfigInvalid/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/tsconfigInvalid/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/tsconfigInvalid/expectedOutput/output.txt
diff --git a/test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/tsconfigInvalidFile/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/tsconfigInvalidFile/expectedOutput-6.0/bundle.js b/test/comparison-tests/tsconfigInvalidFile/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/tsconfigInvalidFile/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/tsconfigInvalidFile/expectedOutput/bundle.js
diff --git a/test/comparison-tests/tsconfigInvalidFile/expectedOutput-6.0/output.txt b/test/comparison-tests/tsconfigInvalidFile/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/tsconfigInvalidFile/expectedOutput-6.0/output.txt
rename to test/comparison-tests/tsconfigInvalidFile/expectedOutput/output.txt
diff --git a/test/comparison-tests/tsconfigSearch/expectedOutput-6.0/bundle.js b/test/comparison-tests/tsconfigSearch/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/tsconfigSearch/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/tsconfigSearch/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/tsconfigSearch/expectedOutput-6.0/output.txt b/test/comparison-tests/tsconfigSearch/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/tsconfigSearch/expectedOutput-6.0/output.txt
rename to test/comparison-tests/tsconfigSearch/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/tsconfigSearch/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/tsconfigSearch/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/tsconfigSearch/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/tsconfigSearch/expectedOutput/bundle.js
diff --git a/test/comparison-tests/tsconfigSearch/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/tsconfigSearch/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/tsconfigSearch/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/tsconfigSearch/expectedOutput/output.txt
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-6.0/bundle.js b/test/comparison-tests/typeSystemWatch/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/typeSystemWatch/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/typeSystemWatch/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/output.txt
rename to test/comparison-tests/typeSystemWatch/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch0/bundle.js b/test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch0/bundle.js
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch0/bundle.js
rename to test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch0/bundle.js
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch0/output.txt b/test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch0/output.txt
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch0/output.txt
rename to test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch0/output.txt
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch1/bundle.js b/test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch1/bundle.js
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch1/bundle.js
rename to test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch1/bundle.js
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch1/output.txt b/test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch1/output.txt
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch1/output.txt
rename to test/comparison-tests/typeSystemWatch/expectedOutput-transpile/patch1/output.txt
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/typeSystemWatch/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/bundle.js
rename to test/comparison-tests/typeSystemWatch/expectedOutput/bundle.js
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-6.0/output.txt b/test/comparison-tests/typeSystemWatch/expectedOutput/output.txt
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-6.0/output.txt
rename to test/comparison-tests/typeSystemWatch/expectedOutput/output.txt
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch0/bundle.js b/test/comparison-tests/typeSystemWatch/expectedOutput/patch0/bundle.js
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch0/bundle.js
rename to test/comparison-tests/typeSystemWatch/expectedOutput/patch0/bundle.js
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch0/output.txt b/test/comparison-tests/typeSystemWatch/expectedOutput/patch0/output.txt
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch0/output.txt
rename to test/comparison-tests/typeSystemWatch/expectedOutput/patch0/output.txt
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch1/bundle.js b/test/comparison-tests/typeSystemWatch/expectedOutput/patch1/bundle.js
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-transpile-6.0/patch1/bundle.js
rename to test/comparison-tests/typeSystemWatch/expectedOutput/patch1/bundle.js
diff --git a/test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch1/output.txt b/test/comparison-tests/typeSystemWatch/expectedOutput/patch1/output.txt
similarity index 100%
rename from test/comparison-tests/typeSystemWatch/expectedOutput-6.0/patch1/output.txt
rename to test/comparison-tests/typeSystemWatch/expectedOutput/patch1/output.txt
diff --git a/test/comparison-tests/validateLoaderOptionNames/expectedOutput-6.0/bundle.js b/test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile/bundle.js
similarity index 100%
rename from test/comparison-tests/validateLoaderOptionNames/expectedOutput-6.0/bundle.js
rename to test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile/bundle.js
diff --git a/test/comparison-tests/validateLoaderOptionNames/expectedOutput-6.0/output.txt b/test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile/output.txt
similarity index 100%
rename from test/comparison-tests/validateLoaderOptionNames/expectedOutput-6.0/output.txt
rename to test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile/output.txt
diff --git a/test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile-6.0/bundle.js b/test/comparison-tests/validateLoaderOptionNames/expectedOutput/bundle.js
similarity index 100%
rename from test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile-6.0/bundle.js
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diff --git a/test/comparison-tests/validateLoaderOptionNames/expectedOutput-transpile-6.0/output.txt b/test/comparison-tests/validateLoaderOptionNames/expectedOutput/output.txt
similarity index 100%
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