batss/pyproject.toml at main · UC-Davis-molecular-computing/batss · GitHub

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[build-system]
requires = ["maturin>=1.0,<2.0"]
build-backend = "maturin"

[project]
name = "batss"
version = "1.0.2"
description = "A Python package with Rust backend for efficient simulation of chemical reaction networks using a batching algorithm."
requires-python = ">=3.10"
readme = "README.md"
classifiers = [
    "Programming Language :: Python :: 3",
    "Programming Language :: Rust",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
]
dependencies = [
    "numpy>=2",
    "jupyterlab>=4",
    "matplotlib>=3",
    "types-tqdm>=4",
    "types-seaborn>=0.13",
    "ipywidgets>=8",
    "seaborn>=0.13",
    "pandas>=2",
    "tqdm>=4",
    "natsort>=8",
    "gpac>=1",
    "polars>=1",
]

[project.urls]
Homepage = "https://github.com/UC-Davis-molecular-computing/batss"
Issues = "https://github.com/UC-Davis-molecular-computing/batss/issues"
API = "https://batss.readthedocs.io/"

[tool.maturin]
features = ["pyo3/extension-module"]
python-source = "python"
module-name = "batss.batss_rust.batss_rust"
include = ["batss/**/*.py", "batss/**/*.pyi", "batss/py.typed", "MANIFEST.in"]
# Ignore CONDA_PREFIX environment variable to avoid conflicts with virtual environments
ignore-conda-prefix = true

[project.optional-dependencies]
docs = [
    "sphinx>=7.0.0",
    "sphinx-rtd-theme",
    "sphinx-autodoc-typehints",
    "toml",
    # Minimal runtime deps needed for autodoc
    "numpy>=2",
    "typing-extensions",
]