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removed duplicate ppmdev column in DIMS/preprocessing/collect_filled_functions.R
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DIMS/preprocessing/collect_filled_functions.R

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -129,7 +129,7 @@ order_columns_peakgrouplist <- function(peakgroup_list) {
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original_colnames <- colnames(peakgroup_list)
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mass_columns <- c(grep("mzm", original_colnames), grep("nrsamples", original_colnames))
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descriptive_columns <- c(grep("assi_HMDB", original_colnames):grep("avg.int", original_colnames), grep("ppmdev", original_colnames))
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descriptive_columns <- grep("assi_HMDB", original_colnames):grep("avg.int", original_colnames)
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intensity_columns <- c((grep("nrsamples", original_colnames) + 1):(grep("assi_HMDB", original_colnames) - 1))
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# if no Z-scores have been calculated, the following two variables will be empty without consequences for outlist_total
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control_columns <- grep ("ctrls", original_colnames)

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