Merge pull request #39 from UW-Madison-DataScience/update/packages

Update 6 packages

Author: sstevens2

renv/activate.R

@@ -2,8 +2,8 @@
 local({
 
   # the requested version of renv
-  version <- "1.2.0"
-  attr(version, "md5") <- "b7d230b07507f361d3bcf794d157a188"
+  version <- "1.2.2"
+  attr(version, "md5") <- "bb69b6403b1bad0442657e9e8e57cc83"
   attr(version, "sha") <- NULL
 
   # the project directory

renv/profiles/lesson-requirements/renv.lock

@@ -41,7 +41,7 @@
       "NeedsCompilation": "no",
       "Author": "Winston Chang [aut, cre], Posit Software, PBC [cph, fnd]",
       "Maintainer": "Winston Chang <winston@posit.co>",
-      "Repository": "CRAN"
+      "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest"
     },
     "base64enc": {
       "Package": "base64enc",
@@ -123,7 +123,7 @@
       "NeedsCompilation": "no",
       "Author": "Carson Sievert [aut, cre] (ORCID: <https://orcid.org/0000-0002-4958-2844>), Joe Cheng [aut], Garrick Aden-Buie [aut] (ORCID: <https://orcid.org/0000-0002-7111-0077>), Posit Software, PBC [cph, fnd], Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Javi Aguilar [ctb, cph] (Bootstrap colorpicker library), Thomas Park [ctb, cph] (Bootswatch library), PayPal [ctb, cph] (Bootstrap accessibility plugin)",
       "Maintainer": "Carson Sievert <carson@posit.co>",
-      "Repository": "CRAN"
+      "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest"
     },
     "cachem": {
       "Package": "cachem",
@@ -153,10 +153,10 @@
     },
     "cli": {
       "Package": "cli",
-      "Version": "3.6.5",
+      "Version": "3.6.6",
       "Source": "Repository",
       "Title": "Helpers for Developing Command Line Interfaces",
-      "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"gabor@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kirill\", \"Müller\", role = \"ctb\"), person(\"Salim\", \"Brüggemann\", , \"salim-b@pm.me\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
+      "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"gabor@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kirill\", \"Müller\", role = \"ctb\"), person(\"Salim\", \"Brüggemann\", , \"salim-b@pm.me\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )",
       "Description": "A suite of tools to build attractive command line interfaces ('CLIs'), from semantic elements: headings, lists, alerts, paragraphs, etc. Supports custom themes via a 'CSS'-like language. It also contains a number of lower level 'CLI' elements: rules, boxes, trees, and 'Unicode' symbols with 'ASCII' alternatives. It support ANSI colors and text styles as well.",
       "License": "MIT + file LICENSE",
       "URL": "https://cli.r-lib.org, https://github.com/r-lib/cli",
@@ -191,10 +191,11 @@
       ],
       "Config/Needs/website": "r-lib/asciicast, bench, brio, cpp11, decor, desc, fansi, prettyunits, sessioninfo, tidyverse/tidytemplate, usethis, vctrs",
       "Config/testthat/edition": "3",
+      "Config/usethis/last-upkeep": "2025-04-25",
       "Encoding": "UTF-8",
-      "RoxygenNote": "7.3.2",
+      "RoxygenNote": "7.3.2.9000",
       "NeedsCompilation": "yes",
-      "Author": "Gábor Csárdi [aut, cre], Hadley Wickham [ctb], Kirill Müller [ctb], Salim Brüggemann [ctb] (<https://orcid.org/0000-0002-5329-5987>), Posit Software, PBC [cph, fnd]",
+      "Author": "Gábor Csárdi [aut, cre], Hadley Wickham [ctb], Kirill Müller [ctb], Salim Brüggemann [ctb] (ORCID: <https://orcid.org/0000-0002-5329-5987>), Posit Software, PBC [cph, fnd] (ROR: <https://ror.org/03wc8by49>)",
       "Maintainer": "Gábor Csárdi <gabor@posit.co>",
       "Repository": "CRAN"
     },
@@ -320,7 +321,7 @@
     },
     "fs": {
       "Package": "fs",
-      "Version": "2.0.1",
+      "Version": "2.1.0",
       "Source": "Repository",
       "Title": "Cross-Platform File System Operations Based on 'libuv'",
       "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Hadley\", \"Wickham\", role = \"aut\"), person(\"Gábor\", \"Csárdi\", role = \"aut\"), person(\"Jeroen\", \"Ooms\", , \"jeroenooms@gmail.com\", role = \"cre\"), person(\"libuv project contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Joyent, Inc. and other Node contributors\", role = \"cph\", comment = \"libuv library\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )",
@@ -674,7 +675,7 @@
     },
     "renv": {
       "Package": "renv",
-      "Version": "1.2.0",
+      "Version": "1.2.2",
       "Source": "Repository",
       "Type": "Package",
       "Title": "Project Environments",
@@ -716,20 +717,20 @@
         "webfakes"
       ],
       "Encoding": "UTF-8",
-      "NeedsCompilation": "yes",
       "RoxygenNote": "7.3.3",
       "VignetteBuilder": "knitr",
       "Config/Needs/website": "tidyverse/tidytemplate",
       "Config/testthat/edition": "3",
       "Config/testthat/parallel": "true",
       "Config/testthat/start-first": "bioconductor,python,install,restore,snapshot,retrieve,remotes",
+      "NeedsCompilation": "no",
       "Author": "Kevin Ushey [aut, cre] (ORCID: <https://orcid.org/0000-0003-2880-7407>), Hadley Wickham [aut] (ORCID: <https://orcid.org/0000-0003-4757-117X>), Posit Software, PBC [cph, fnd]",
       "Maintainer": "Kevin Ushey <kevin@rstudio.com>",
-      "Repository": "CRAN"
+      "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest"
     },
     "rlang": {
       "Package": "rlang",
-      "Version": "1.1.7",
+      "Version": "1.2.0",
       "Source": "Repository",
       "Title": "Functions for Base Types and Core R and 'Tidyverse' Features",
       "Description": "A toolbox for working with base types, core R features like the condition system, and core 'Tidyverse' features like tidy evaluation.",
@@ -757,7 +758,7 @@
         "pkgload",
         "rmarkdown",
         "stats",
-        "testthat (>= 3.2.0)",
+        "testthat (>= 3.3.2)",
         "tibble",
         "usethis",
         "vctrs (>= 0.2.3)",
@@ -780,7 +781,7 @@
     },
     "rmarkdown": {
       "Package": "rmarkdown",
-      "Version": "2.30",
+      "Version": "2.31",
       "Source": "Repository",
       "Type": "Package",
       "Title": "Dynamic Documents for R",
@@ -827,12 +828,12 @@
       "Config/Needs/website": "rstudio/quillt, pkgdown",
       "Config/testthat/edition": "3",
       "Encoding": "UTF-8",
-      "RoxygenNote": "7.3.2",
+      "RoxygenNote": "7.3.3",
       "SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org",
       "NeedsCompilation": "no",
       "Author": "JJ Allaire [aut], Yihui Xie [aut, cre] (ORCID: <https://orcid.org/0000-0003-0645-5666>), Christophe Dervieux [aut] (ORCID: <https://orcid.org/0000-0003-4474-2498>), Jonathan McPherson [aut], Javier Luraschi [aut], Kevin Ushey [aut], Aron Atkins [aut], Hadley Wickham [aut], Joe Cheng [aut], Winston Chang [aut], Richard Iannone [aut] (ORCID: <https://orcid.org/0000-0003-3925-190X>), Andrew Dunning [ctb] (ORCID: <https://orcid.org/0000-0003-0464-5036>), Atsushi Yasumoto [ctb, cph] (ORCID: <https://orcid.org/0000-0002-8335-495X>, cph: Number sections Lua filter), Barret Schloerke [ctb], Carson Sievert [ctb] (ORCID: <https://orcid.org/0000-0002-4958-2844>), Devon Ryan [ctb] (ORCID: <https://orcid.org/0000-0002-8549-0971>), Frederik Aust [ctb] (ORCID: <https://orcid.org/0000-0003-4900-788X>), Jeff Allen [ctb], JooYoung Seo [ctb] (ORCID: <https://orcid.org/0000-0002-4064-6012>), Malcolm Barrett [ctb], Rob Hyndman [ctb], Romain Lesur [ctb], Roy Storey [ctb], Ruben Arslan [ctb], Sergio Oller [ctb], Posit Software, PBC [cph, fnd], jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/rmd/h/jqueryui/AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Alexander Farkas [ctb, cph] (html5shiv library), Scott Jehl [ctb, cph] (Respond.js library), Ivan Sagalaev [ctb, cph] (highlight.js library), Greg Franko [ctb, cph] (tocify library), John MacFarlane [ctb, cph] (Pandoc templates), Google, Inc. [ctb, cph] (ioslides library), Dave Raggett [ctb] (slidy library), W3C [cph] (slidy library), Dave Gandy [ctb, cph] (Font-Awesome), Ben Sperry [ctb] (Ionicons), Drifty [cph] (Ionicons), Aidan Lister [ctb, cph] (jQuery StickyTabs), Benct Philip Jonsson [ctb, cph] (pagebreak Lua filter), Albert Krewinkel [ctb, cph] (pagebreak Lua filter)",
       "Maintainer": "Yihui Xie <xie@yihui.name>",
-      "Repository": "CRAN"
+      "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest"
     },
     "sass": {
       "Package": "sass",
@@ -868,11 +869,11 @@
       "NeedsCompilation": "yes",
       "Author": "Joe Cheng [aut], Timothy Mastny [aut], Richard Iannone [aut] (<https://orcid.org/0000-0003-3925-190X>), Barret Schloerke [aut] (<https://orcid.org/0000-0001-9986-114X>), Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>), Christophe Dervieux [ctb] (<https://orcid.org/0000-0003-4474-2498>), RStudio [cph, fnd], Sass Open Source Foundation [ctb, cph] (LibSass library), Greter Marcel [ctb, cph] (LibSass library), Mifsud Michael [ctb, cph] (LibSass library), Hampton Catlin [ctb, cph] (LibSass library), Natalie Weizenbaum [ctb, cph] (LibSass library), Chris Eppstein [ctb, cph] (LibSass library), Adams Joseph [ctb, cph] (json.cpp), Trifunovic Nemanja [ctb, cph] (utf8.h)",
       "Maintainer": "Carson Sievert <carson@rstudio.com>",
-      "Repository": "CRAN"
+      "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest"
     },
     "tinytex": {
       "Package": "tinytex",
-      "Version": "0.58",
+      "Version": "0.59",
       "Source": "Repository",
       "Type": "Package",
       "Title": "Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents",