Merge pull request #1259 from ocefpaf/remove_deprecated_GHA

provision-with-micromamba is deprecated

Author: Jeff Whitaker

.github/workflows/miniconda.yml

@@ -24,29 +24,24 @@ jobs:
     - uses: actions/checkout@v3
 
     - name: Setup Micromamba
-      uses: mamba-org/provision-with-micromamba@v16
+      uses: mamba-org/setup-micromamba@v1
       with:
-        environment-file: false
+        environment-name: TEST
+        init-shell: bash
+        create-args: >-
+          python=${{ matrix.python-version }}
+          numpy cython pip pytest hdf5 libnetcdf cftime zlib
+          --channel conda-forge
 
-    - name: Python ${{ matrix.python-version }}
+    - name: Install netcdf4-python
       shell: bash -l {0}
       run: |
-        micromamba create --name TEST python=${{ matrix.python-version }} numpy cython pip pytest hdf5 libnetcdf cftime zlib --channel conda-forge
-        micromamba activate TEST
         export PATH="${CONDA_PREFIX}/bin:${CONDA_PREFIX}/Library/bin:$PATH" # so setup.py finds nc-config
-        pip install -v -e . --no-deps --force-reinstall
-
-    - name: Debug conda
-      shell: bash -l {0}
-      run: |
-        micromamba activate TEST
-        micromamba info --all
-        micromamba list
+        python -m pip install -v -e . --no-deps --force-reinstall
 
     - name: Tests
       shell: bash -l {0}
       run: |
-        micromamba activate TEST
         cd test && python run_all.py
 
   run-mpi:
@@ -60,30 +55,25 @@ jobs:
     - uses: actions/checkout@v3
 
     - name: Setup Micromamba
-      uses: mamba-org/provision-with-micromamba@main
+      uses: mamba-org/setup-micromamba@v1
       with:
-        environment-file: false
+        environment-name: TEST
+        init-shell: bash
+        create-args: >-
+          python=${{ matrix.python-version }}
+          numpy cython pip pytest mpi4py hdf5=*=mpi* libnetcdf=*=mpi* cftime zlib
+          --channel conda-forge
 
-    - name: Python ${{ matrix.python-version }}
+    - name: Install netcdf4-python with mpi
       shell: bash -l {0}
       run: |
-        micromamba create --name TEST python=${{ matrix.python-version }} numpy cython pip pytest mpi4py hdf5=*=mpi* libnetcdf=*=mpi* cftime zlib --channel conda-forge
-        micromamba activate TEST
         export PATH="${CONDA_PREFIX}/bin:${CONDA_PREFIX}/Library/bin:$PATH" # so setup.py finds nc-config
         nc-config --all
-        pip install -v -e . --no-build-isolation --no-deps --force-reinstall
-
-    - name: Debug conda
-      shell: bash -l {0}
-      run: |
-        micromamba activate TEST
-        micromamba info --all
-        micromamba list
+        python -m pip install -v -e . --no-build-isolation --no-deps --force-reinstall
 
     - name: Tests
       shell: bash -l {0}
       run: |
-        micromamba activate TEST
         cd test && python run_all.py
         cd ../examples
         export PATH="${CONDA_PREFIX}/bin:${CONDA_PREFIX}/Library/bin:$PATH"