Merge pull request #1187 from ocefpaf/check_win_failure

try micromamba

Author: Jeff Whitaker

.github/workflows/miniconda.yml

@@ -18,29 +18,35 @@ jobs:
         exclude:
           - os: macos-latest  
             platform: x32
+      fail-fast: false
+
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@v13
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
     - name: Python ${{ matrix.python-version }}
       shell: bash -l {0}
       run: |
-        conda create --name TEST python=${{ matrix.python-version }} numpy cython pip pytest hdf5 libnetcdf cftime --strict-channel-priority
-        source activate TEST
+        micromamba create --name TEST python=${{ matrix.python-version }} numpy cython pip pytest hdf5 libnetcdf cftime zlib --channel conda-forge
+        micromamba activate TEST
         export PATH="${CONDA_PREFIX}/bin:${CONDA_PREFIX}/Library/bin:$PATH" # so setup.py finds nc-config
         pip install -e . --no-deps --force-reinstall
-        conda info --all
-        conda list
+
+    - name: Debug conda
+      shell: bash -l {0}
+      run: |
+        micromamba activate TEST
+        micromamba info --all
+        micromamba list
 
     - name: Tests
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         cd test && python run_all.py
 
   run-mpi:
@@ -53,26 +59,30 @@ jobs:
     steps:
     - uses: actions/checkout@v2
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@main
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
     - name: Python ${{ matrix.python-version }}
       shell: bash -l {0}
       run: |
-        conda create --name TEST python=${{ matrix.python-version }} numpy cython pip pytest mpi4py hdf5=*=mpi* libnetcdf=*=mpi* cftime --strict-channel-priority
-        source activate TEST
+        micromamba create --name TEST python=${{ matrix.python-version }} numpy cython pip pytest mpi4py hdf5=*=mpi* libnetcdf=*=mpi* cftime zlib --channel conda-forge
+        micromamba activate TEST
         export PATH="${CONDA_PREFIX}/bin:${CONDA_PREFIX}/Library/bin:$PATH" # so setup.py finds nc-config
         pip install -e . --no-deps --force-reinstall
-        conda info --all
-        conda list
+
+    - name: Debug conda
+      shell: bash -l {0}
+      run: |
+        micromamba activate TEST
+        micromamba info --all
+        micromamba list
 
     - name: Tests
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         cd test && python run_all.py
         cd ../examples
         export PATH="${CONDA_PREFIX}/bin:${CONDA_PREFIX}/Library/bin:$PATH"