update pull request action t master branch #1
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| name: shpc test core | ||
| on: | ||
| pull_request: [] | ||
| jobs: | ||
| test: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Singularity install with defaults | ||
| uses: singularityhub/install-singularity@main | ||
| - name: Create conda environment | ||
| run: conda create --quiet -c conda-forge --name shpc spython | ||
| - uses: actions/checkout@v3 | ||
| - name: Install shpc | ||
| run: | | ||
| export PATH="/usr/share/miniconda/bin:$PATH" | ||
| source activate shpc | ||
| pip install -e .[all] | ||
| - name: Run python module tests (bash) | ||
| shell: bash | ||
| run: | | ||
| export PATH="/usr/share/miniconda/bin:$PATH" | ||
| source activate shpc | ||
| which shpc | ||
| cd shpc/tests | ||
| pytest -sxv test_*.py | ||
