From f55a12d9bc7b45d1efe72fc6618054b9c32553b1 Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:19:09 +0800
Subject: [PATCH 1/7] Create docker setup README.md

---
 Docker Setup/README.md | 10 ++++++++++
 1 file changed, 10 insertions(+)
 create mode 100644 Docker Setup/README.md

diff --git a/Docker Setup/README.md b/Docker Setup/README.md
new file mode 100644
index 0000000..6b00b4a
--- /dev/null
+++ b/Docker Setup/README.md	
@@ -0,0 +1,10 @@
+# ISBNet Setup Using Docker
+
+## 1. Docker Setup
+
+### Pull the Docker Image
+
+To pull the Docker image for ISBNet, run the following command:
+
+```bash
+docker pull rayyoh/oneformer3d

From 7bb3e89b1d16a8b8866de35a4e03bfc5aa981bef Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:20:07 +0800
Subject: [PATCH 2/7] Update README.md

---
 Docker Setup/README.md | 59 ++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 59 insertions(+)

diff --git a/Docker Setup/README.md b/Docker Setup/README.md
index 6b00b4a..be6c137 100644
--- a/Docker Setup/README.md	
+++ b/Docker Setup/README.md	
@@ -1,3 +1,7 @@
+GitHub.
+
+markdown
+Copy code
 # ISBNet Setup Using Docker
 
 ## 1. Docker Setup
@@ -8,3 +12,58 @@ To pull the Docker image for ISBNet, run the following command:
 
 ```bash
 docker pull rayyoh/oneformer3d
+Clone ISBNet Repository
+Clone the ISBNet repository using Git:
+
+bash
+Copy code
+git clone https://github.com/VinAIResearch/ISBNet.git
+Run Docker Container
+Run the Docker container with the appropriate settings. Ensure that you have a GPU enabled for this setup.
+
+bash
+Copy code
+docker run --gpus all -it --shm-size=8g --cpus=4 -e PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:128 -v C:\Users\Perception-Team\ISBNet:/workspace -p 6008:6008 --name isnbet check
+Install Python Requirements Inside the Container
+After entering the Docker container, install the required Python dependencies:
+
+bash
+Copy code
+pip3 install -r requirements.txt
+Build Segmentator Inside Docker
+Clone the Segmentator repository and build it inside the Docker container:
+
+bash
+Copy code
+git clone https://github.com/Karbo123/segmentator.git
+cd segmentator/csrc
+mkdir build && cd build
+cmake .. \
+  -DCMAKE_PREFIX_PATH=`python -c 'import torch; print(torch.utils.cmake_prefix_path)'` \
+  -DPYTHON_INCLUDE_DIR=$(python -c "from distutils.sysconfig import get_python_inc; print(get_python_inc())") \
+  -DPYTHON_LIBRARY=$(python -c "import distutils.sysconfig as sysconfig; print(sysconfig.get_config_var('LIBDIR'))") \
+  -DCMAKE_INSTALL_PREFIX=`python -c 'from distutils.sysconfig import get_python_lib; print(get_python_lib())'`
+make && make install
+Install Additional Dependencies
+Install any additional dependencies required for the setup:
+
+bash
+Copy code
+apt-get install libsparsehash-dev
+Setup PointNet2
+Navigate to the pointnet2 directory inside the ISBNet folder and install it:
+
+bash
+Copy code
+cd isbnet/pointnet2
+python3 setup.py bdist_wheel
+cd ./dist
+pip3 install pointnet2-0.0.0-cp310-cp310-linux_x86_64.whl
+Final Build
+To complete the final setup and build process, run the following commands:
+
+bash
+Copy code
+cd ../../..
+python3 setup.py build_ext develop
+By following these steps, you should have ISBNet successfully set up in Docker and ready for use.

From c891afe88c416ca4bcbf012fa5cd9ce21639b26d Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:30:51 +0800
Subject: [PATCH 3/7] Update README.md

---
 Docker Setup/README.md | 78 ++++++++++++++++++++----------------------
 1 file changed, 37 insertions(+), 41 deletions(-)

diff --git a/Docker Setup/README.md b/Docker Setup/README.md
index be6c137..6bef90f 100644
--- a/Docker Setup/README.md	
+++ b/Docker Setup/README.md	
@@ -1,69 +1,65 @@
-GitHub.
-
-markdown
-Copy code
 # ISBNet Setup Using Docker
 
-## 1. Docker Setup
+Follow the steps below to set up ISBNet with Docker, including pulling the necessary Docker image, cloning the repository, and installing required dependencies.
 
-### Pull the Docker Image
+## 1. Pull the Docker Image
 
-To pull the Docker image for ISBNet, run the following command:
+First, pull the Docker image `rayyoh/oneformer3d`:
 
 ```bash
+
 docker pull rayyoh/oneformer3d
-Clone ISBNet Repository
-Clone the ISBNet repository using Git:
+```
+
+## 2. Clone ISBNet Repository
+
+```bash
+git clone https://github.com/VinAIResearch/ISBNet/tree/master
+```
 
-bash
-Copy code
-git clone https://github.com/VinAIResearch/ISBNet.git
-Run Docker Container
-Run the Docker container with the appropriate settings. Ensure that you have a GPU enabled for this setup.
+## 3. Run Docker Container
 
-bash
-Copy code
+```bash
 docker run --gpus all -it --shm-size=8g --cpus=4 -e PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:128 -v C:\Users\Perception-Team\ISBNet:/workspace -p 6008:6008 --name isnbet check
-Install Python Requirements Inside the Container
-After entering the Docker container, install the required Python dependencies:
+```
 
-bash
-Copy code
+## 4. Install Python Requirements Inside the container:
+
+```bash
 pip3 install -r requirements.txt
-Build Segmentator Inside Docker
-Clone the Segmentator repository and build it inside the Docker container:
+```
+## 5. Build Segmentator Again Inside Docker
 
-bash
-Copy code
+```bash
 git clone https://github.com/Karbo123/segmentator.git
 cd segmentator/csrc
 mkdir build && cd build
 cmake .. \
-  -DCMAKE_PREFIX_PATH=`python -c 'import torch; print(torch.utils.cmake_prefix_path)'` \
-  -DPYTHON_INCLUDE_DIR=$(python -c "from distutils.sysconfig import get_python_inc; print(get_python_inc())") \
-  -DPYTHON_LIBRARY=$(python -c "import distutils.sysconfig as sysconfig; print(sysconfig.get_config_var('LIBDIR'))") \
-  -DCMAKE_INSTALL_PREFIX=`python -c 'from distutils.sysconfig import get_python_lib; print(get_python_lib())'`
+-DCMAKE_PREFIX_PATH=`python -c 'import torch; print(torch.utils.cmake_prefix_path)'` \
+-DPYTHON_INCLUDE_DIR=$(python -c "from distutils.sysconfig import get_python_inc; print(get_python_inc())") \
+-DPYTHON_LIBRARY=$(python -c "import distutils.sysconfig as sysconfig; print(sysconfig.get_config_var('LIBDIR'))") \
+-DCMAKE_INSTALL_PREFIX=`python -c 'from distutils.sysconfig import get_python_lib; print(get_python_lib())'`
 make && make install
-Install Additional Dependencies
-Install any additional dependencies required for the setup:
+ ```
+
+## 6. Install libsparsehash-dev
 
-bash
-Copy code
+```bash
 apt-get install libsparsehash-dev
-Setup PointNet2
-Navigate to the pointnet2 directory inside the ISBNet folder and install it:
+```
+## 7. Setup PointNet2
+
+```bash
 
-bash
-Copy code
 cd isbnet/pointnet2
 python3 setup.py bdist_wheel
 cd ./dist
 pip3 install pointnet2-0.0.0-cp310-cp310-linux_x86_64.whl
-Final Build
-To complete the final setup and build process, run the following commands:
+```
+## 8. Final Build
 
-bash
-Copy code
+```bash
 cd ../../..
 python3 setup.py build_ext develop
-By following these steps, you should have ISBNet successfully set up in Docker and ready for use.
+```
+

From 49b01ccc8731fbd2ded9f7c4d32604441e87a806 Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:32:58 +0800
Subject: [PATCH 4/7] Docker file

---
 Docker Setup/Dockerfile | 87 +++++++++++++++++++++++++++++++++++++++++
 1 file changed, 87 insertions(+)
 create mode 100644 Docker Setup/Dockerfile

diff --git a/Docker Setup/Dockerfile b/Docker Setup/Dockerfile
new file mode 100644
index 0000000..d855b5f
--- /dev/null
+++ b/Docker Setup/Dockerfile	
@@ -0,0 +1,87 @@
+FROM pytorch/pytorch:1.13.1-cuda11.6-cudnn8-devel
+
+RUN apt-key adv --fetch-keys https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1804/x86_64/3bf863cc.pub \
+    && apt-key adv --fetch-keys https://developer.download.nvidia.com/compute/machine-learning/repos/ubuntu1804/x86_64/7fa2af80.pub \
+    && apt-get update \
+    && apt-get install -y ffmpeg libsm6 libxext6 git ninja-build libglib2.0-0 libsm6 libxrender-dev libxext6
+
+# Install MinkowskiEngine
+# Feel free to skip nvidia-cuda-dev if minkowski installation is fine
+RUN apt-get update \
+    && apt-get -y install libopenblas-dev nvidia-cuda-dev
+
+
+# Install torch-scatter 
+RUN pip install torch-scatter==2.1.2 -f https://data.pyg.org/whl/torch-1.13.0+cu116.html --no-deps
+
+# Install ScanNet superpoint segmentator
+RUN git clone https://github.com/Karbo123/segmentator.git \
+    && cd segmentator/csrc \
+    && git reset --hard 76efe46d03dd27afa78df972b17d07f2c6cfb696 \
+    && mkdir build \
+    && cd build \
+    && cmake .. \
+        -DCMAKE_PREFIX_PATH=`python -c 'import torch;print(torch.utils.cmake_prefix_path)'` \
+        -DPYTHON_INCLUDE_DIR=$(python -c "from distutils.sysconfig import get_python_inc; print(get_python_inc())") \
+        -DPYTHON_LIBRARY=$(python -c "import distutils.sysconfig as sysconfig; print(sysconfig.get_config_var('LIBDIR'))") \
+        -DCMAKE_INSTALL_PREFIX=`python -c 'from distutils.sysconfig import get_python_lib; print(get_python_lib())'` \
+    && make \
+    && make install \
+    && cd ../../..
+
+# Install remaining python packages
+RUN pip install --no-deps \
+    munch \
+    pyyaml \
+    six \
+    tensorboard \
+    tensorboardX \
+    tqdm \
+    imageio \
+    setuptools \
+    protobuf \
+    spconv-cu116==2.3.6 \
+    addict==2.4.0 \
+    yapf==0.33.0 \
+    termcolor==2.3.0 \
+    packaging==23.1 \
+    numpy==1.24.1 \
+    rich==13.3.5 \
+    opencv-python==4.7.0.72 \
+    pycocotools==2.0.6 \
+    Shapely==1.8.5 \
+    scipy==1.10.1 \
+    terminaltables==3.1.10 \
+    numba==0.57.0 \
+    llvmlite==0.40.0 \
+    pccm==0.4.7 \
+    ccimport==0.4.2 \
+    pybind11==2.10.4 \
+    ninja==1.11.1 \
+    lark==1.1.5 \
+    cumm-cu116==0.4.9 \
+    pyquaternion==0.9.9 \
+    lyft-dataset-sdk==0.0.8 \
+    pandas==2.0.1 \
+    python-dateutil==2.8.2 \
+    matplotlib==3.5.2 \
+    pyparsing==3.0.9 \
+    cycler==0.11.0 \
+    kiwisolver==1.4.4 \
+    scikit-learn==1.2.2 \
+    joblib==1.2.0 \
+    threadpoolctl==3.1.0 \
+    cachetools==5.3.0 \
+    nuscenes-devkit==1.1.10 \
+    trimesh==3.21.6 \
+    open3d==0.17.0 \
+    plotly==5.18.0 \
+    dash==2.14.2 \
+    plyfile==1.0.2 \
+    flask==3.0.0 \
+    werkzeug==3.0.1 \
+    click==8.1.7 \
+    blinker==1.7.0 \
+    itsdangerous==2.1.2 \
+    importlib_metadata==2.1.2 \
+    zipp==3.17.0
\ No newline at end of file

From b70c74cefcef1c1b646fe5242cb27c215c4c7e9b Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:34:16 +0800
Subject: [PATCH 5/7] Update Dockerfile for isbnet

---
 Docker Setup/Dockerfile | 17 +----------------
 1 file changed, 1 insertion(+), 16 deletions(-)

diff --git a/Docker Setup/Dockerfile b/Docker Setup/Dockerfile
index d855b5f..e3ce8b0 100644
--- a/Docker Setup/Dockerfile	
+++ b/Docker Setup/Dockerfile	
@@ -14,21 +14,6 @@ RUN apt-get update \
 # Install torch-scatter 
 RUN pip install torch-scatter==2.1.2 -f https://data.pyg.org/whl/torch-1.13.0+cu116.html --no-deps
 
-# Install ScanNet superpoint segmentator
-RUN git clone https://github.com/Karbo123/segmentator.git \
-    && cd segmentator/csrc \
-    && git reset --hard 76efe46d03dd27afa78df972b17d07f2c6cfb696 \
-    && mkdir build \
-    && cd build \
-    && cmake .. \
-        -DCMAKE_PREFIX_PATH=`python -c 'import torch;print(torch.utils.cmake_prefix_path)'` \
-        -DPYTHON_INCLUDE_DIR=$(python -c "from distutils.sysconfig import get_python_inc; print(get_python_inc())") \
-        -DPYTHON_LIBRARY=$(python -c "import distutils.sysconfig as sysconfig; print(sysconfig.get_config_var('LIBDIR'))") \
-        -DCMAKE_INSTALL_PREFIX=`python -c 'from distutils.sysconfig import get_python_lib; print(get_python_lib())'` \
-    && make \
-    && make install \
-    && cd ../../..
-
 # Install remaining python packages
 RUN pip install --no-deps \
     munch \
@@ -84,4 +69,4 @@ RUN pip install --no-deps \
     blinker==1.7.0 \
     itsdangerous==2.1.2 \
     importlib_metadata==2.1.2 \
-    zipp==3.17.0
\ No newline at end of file
+    zipp==3.17.0

From 699d2a2a8b64adef41df3a4895a542bfbd1fdcb7 Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:39:12 +0800
Subject: [PATCH 6/7] Update README.md

---
 Docker Setup/README.md | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/Docker Setup/README.md b/Docker Setup/README.md
index 6bef90f..0831623 100644
--- a/Docker Setup/README.md	
+++ b/Docker Setup/README.md	
@@ -63,3 +63,10 @@ cd ../../..
 python3 setup.py build_ext develop
 ```
 
+### Explanation:
+- The **Alternative Method** section provides the user an option to directly download the Dockerfile and skip the manual image pull process. 
+- You can link to the Dockerfile in your GitHub repository [link](https://github.com/Smith-S-S/ISBNet/blob/master/Docker%20Setup/Dockerfile) and indicate to the user that they can skip the manual `docker pull` command if they choose this method.
+
+
+
+

From d6e08905b99d5f2c9306b56a56f81eb7c3b36f98 Mon Sep 17 00:00:00 2001
From: Smith-S-S <80092760+Smith-S-S@users.noreply.github.com>
Date: Fri, 29 Nov 2024 00:40:22 +0800
Subject: [PATCH 7/7] Update README.md

---
 Docker Setup/README.md | 1 +
 1 file changed, 1 insertion(+)

diff --git a/Docker Setup/README.md b/Docker Setup/README.md
index 0831623..d9515c3 100644
--- a/Docker Setup/README.md	
+++ b/Docker Setup/README.md	
@@ -63,6 +63,7 @@ cd ../../..
 python3 setup.py build_ext develop
 ```
 
+## Todo
 ### Explanation:
 - The **Alternative Method** section provides the user an option to directly download the Dockerfile and skip the manual image pull process. 
 - You can link to the Dockerfile in your GitHub repository [link](https://github.com/Smith-S-S/ISBNet/blob/master/Docker%20Setup/Dockerfile) and indicate to the user that they can skip the manual `docker pull` command if they choose this method.