11# VFBquery Performance Test Results
22
3- ** Test Date:** 2025-11-17 15:18:41 UTC
4- ** Git Commit:** 6770624f924b619cd3340518786dea55f242ae0f
3+ ** Test Date:** 2025-11-17 15:27:32 UTC
4+ ** Git Commit:** 500df8ee7434345403908a18a1bcce9329b1cb9b
55** Branch:** dev
6- ** Workflow Run:** [ 19434585989 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/19434585989 )
6+ ** Workflow Run:** [ 19434865525 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/19434865525 )
77
88## Test Overview
99
@@ -116,7 +116,7 @@ test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerf
116116Test publication and transgene queries ... ok
117117
118118----------------------------------------------------------------------
119- Ran 15 tests in 41.800s
119+ Ran 15 tests in 45.859s
120120
121121OK
122122VFBquery caching enabled: TTL=2160h (90 days), Memory=2048MB
@@ -133,119 +133,119 @@ TERM INFO QUERIES
133133DEBUG: Cache lookup for FBbt_00003748: MISS
134134✅ Neo4j connection established
135135✅ Neo4j connection established
136- get_term_info (mushroom body): 3.0387s ✅
136+ get_term_info (mushroom body): 3.1391s ✅
137137DEBUG: Cache lookup for VFB_00101567: MISS
138- get_term_info (individual): 2.4917s ✅
138+ get_term_info (individual): 2.3525s ✅
139139
140140================================================================================
141141NEURON PART OVERLAP QUERIES
142142================================================================================
143- NeuronsPartHere: 0.9015s ✅
143+ NeuronsPartHere: 1.0766s ✅
144144
145145================================================================================
146146SYNAPTIC TERMINAL QUERIES
147147================================================================================
148- NeuronsSynaptic: 0.8943s ✅
149- NeuronsPresynapticHere: 0.8952s ✅
150- NeuronsPostsynapticHere: 0.9342s ✅
151- NeuronNeuronConnectivity: 0.7443s ✅
148+ NeuronsSynaptic: 0.8742s ✅
149+ NeuronsPresynapticHere: 0.8689s ✅
150+ NeuronsPostsynapticHere: 0.8088s ✅
151+ NeuronNeuronConnectivity: 0.8220s ✅
152152
153153================================================================================
154154ANATOMICAL HIERARCHY QUERIES
155155================================================================================
156- ComponentsOf: 0.7562s ✅
157- PartsOf: 0.5904s ✅
158- SubclassesOf: 0.7383s ✅
156+ ComponentsOf: 0.6238s ✅
157+ PartsOf: 0.7023s ✅
158+ SubclassesOf: 0.7076s ✅
159159
160160================================================================================
161161TRACT/NERVE AND LINEAGE QUERIES
162162================================================================================
163- NeuronClassesFasciculatingHere: 0.8250s ✅
164- TractsNervesInnervatingHere: 0.7642s ✅
165- LineageClonesIn: 0.7019s ✅
163+ NeuronClassesFasciculatingHere: 0.6327s ✅
164+ TractsNervesInnervatingHere: 0.7945s ✅
165+ LineageClonesIn: 0.6341s ✅
166166
167167================================================================================
168168IMAGE AND DEVELOPMENTAL QUERIES
169169================================================================================
170- ImagesNeurons: 0.9623s ✅
171- ImagesThatDevelopFrom: 0.6074s ✅
172- epFrag: 0.6142s ✅
170+ ImagesNeurons: 1.1914s ✅
171+ ImagesThatDevelopFrom: 0.7237s ✅
172+ epFrag: 0.7073s ✅
173173
174174================================================================================
175175INSTANCE QUERIES
176176================================================================================
177- ListAllAvailableImages: 0.5957s ✅
177+ ListAllAvailableImages: 0.6096s ✅
178178
179179================================================================================
180180CONNECTIVITY QUERIES
181181================================================================================
182- NeuronNeuronConnectivityQuery: 0.5969s ✅
183- NeuronRegionConnectivityQuery: 0.5891s ✅
182+ NeuronNeuronConnectivityQuery: 0.7327s ✅
183+ NeuronRegionConnectivityQuery: 0.6222s ✅
184184
185185================================================================================
186186SIMILARITY QUERIES (Neo4j NBLAST)
187187================================================================================
188- SimilarMorphologyTo: 9.6916s ✅
188+ SimilarMorphologyTo: 11.4931s ✅
189189
190190================================================================================
191191NEURON INPUT QUERIES (Neo4j)
192192================================================================================
193- NeuronInputsTo: 2.8143s ✅
193+ NeuronInputsTo: 2.8142s ✅
194194
195195================================================================================
196196EXPRESSION PATTERN QUERIES (Neo4j)
197197================================================================================
198- ExpressionOverlapsHere: 0.7588s ✅
198+ ExpressionOverlapsHere: 0.7708s ✅
199199 └─ Found 3922 total expression patterns, returned 10
200200
201201================================================================================
202202TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
203203================================================================================
204- anatScRNAseqQuery: 0.7091s ✅
204+ anatScRNAseqQuery: 0.6743s ✅
205205 └─ Found 0 total clusters
206- clusterExpression: 0.7149s ✅
206+ clusterExpression: 0.5813s ✅
207207 └─ Found 0 genes expressed
208- expressionCluster: 0.6248s ✅
208+ expressionCluster: 0.5980s ✅
209209 └─ Found 0 clusters expressing gene
210- scRNAdatasetData: 0.7102s ✅
210+ scRNAdatasetData: 0.6593s ✅
211211 └─ Found 0 clusters in dataset
212212
213213================================================================================
214214NBLAST SIMILARITY QUERIES
215215================================================================================
216- SimilarMorphologyTo: 0.7862s ✅
216+ SimilarMorphologyTo: 0.7738s ✅
217217 └─ Found 227 NBLAST matches, returned 10
218- SimilarMorphologyToPartOf: 0.6822s ✅
218+ SimilarMorphologyToPartOf: 0.5750s ✅
219219 └─ Found 0 NBLASTexp matches
220- SimilarMorphologyToPartOfexp: 0.5579s ✅
220+ SimilarMorphologyToPartOfexp: 0.6387s ✅
221221 └─ Found 0 reverse NBLASTexp matches
222- SimilarMorphologyToNB: 0.5143s ✅
222+ SimilarMorphologyToNB: 2.1447s ✅
223223 └─ Found 15 NeuronBridge matches, returned 10
224- SimilarMorphologyToNBexp: 0.5115s ✅
224+ SimilarMorphologyToNBexp: 0.5255s ✅
225225 └─ Found 15 NeuronBridge expression matches, returned 10
226226✅ All NBLAST similarity queries completed
227227
228228================================================================================
229229DATASET/TEMPLATE QUERIES
230230================================================================================
231- PaintedDomains: 0.5419s ✅
231+ PaintedDomains: 0.7501s ✅
232232 └─ Found 0 painted domains
233- DatasetImages: 0.5856s ✅
233+ DatasetImages: 0.5330s ✅
234234 └─ Found 0 images in dataset
235- AllAlignedImages: 0.4882s ✅
235+ AllAlignedImages: 0.5306s ✅
236236 └─ Found 0 aligned images
237- AlignedDatasets: 0.7355s ✅
237+ AlignedDatasets: 0.7615s ✅
238238 └─ Found 0 aligned datasets
239- AllDatasets: 0.7814s ✅
239+ AllDatasets: 1.3396s ✅
240240 └─ Found 115 total datasets, returned 20
241241✅ All dataset/template queries completed
242242
243243================================================================================
244244PUBLICATION/TRANSGENE QUERIES
245245================================================================================
246- TermsForPub: 0.5591s ✅
246+ TermsForPub: 0.4627s ✅
247247 └─ Found 0 terms for publication
248- TransgeneExpressionHere: 0.7860s ✅
248+ TransgeneExpressionHere: 0.6039s ✅
249249 └─ Found 2339 transgene expressions, returned 10
250250✅ All publication/transgene queries completed
251251
@@ -273,9 +273,9 @@ VFBquery: Caching enabled by default (3-month TTL, 2GB memory)
273273==================================================
274274Performance Test Results:
275275==================================================
276- FBbt_00003748 query took: 0.7018 seconds
277- VFB_00101567 query took: 0.6724 seconds
278- Total time for both queries: 1.3743 seconds
276+ FBbt_00003748 query took: 0.7501 seconds
277+ VFB_00101567 query took: 0.6250 seconds
278+ Total time for both queries: 1.3751 seconds
279279Performance Level: 🟢 Excellent (< 1.5 seconds)
280280==================================================
281281Performance test completed successfully!
@@ -294,4 +294,4 @@ Track performance trends across commits:
294294- [ GitHub Actions History] ( https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml )
295295
296296---
297- * Last updated: 2025-11-17 15:18:41 UTC*
297+ * Last updated: 2025-11-17 15:27:32 UTC*
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