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Update performance test results [skip ci]
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performance.md

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# VFBquery Performance Test Results
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**Test Date:** 2025-11-17 15:18:41 UTC
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**Git Commit:** 6770624f924b619cd3340518786dea55f242ae0f
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**Test Date:** 2025-11-17 15:27:32 UTC
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**Git Commit:** 500df8ee7434345403908a18a1bcce9329b1cb9b
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**Branch:** dev
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**Workflow Run:** [19434585989](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/19434585989)
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**Workflow Run:** [19434865525](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/19434865525)
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## Test Overview
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Test publication and transgene queries ... ok
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----------------------------------------------------------------------
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Ran 15 tests in 41.800s
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Ran 15 tests in 45.859s
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OK
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VFBquery caching enabled: TTL=2160h (90 days), Memory=2048MB
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DEBUG: Cache lookup for FBbt_00003748: MISS
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✅ Neo4j connection established
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✅ Neo4j connection established
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get_term_info (mushroom body): 3.0387s
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get_term_info (mushroom body): 3.1391s
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DEBUG: Cache lookup for VFB_00101567: MISS
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get_term_info (individual): 2.4917s
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get_term_info (individual): 2.3525s
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================================================================================
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NEURON PART OVERLAP QUERIES
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================================================================================
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NeuronsPartHere: 0.9015s
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NeuronsPartHere: 1.0766s
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================================================================================
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SYNAPTIC TERMINAL QUERIES
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================================================================================
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NeuronsSynaptic: 0.8943s
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NeuronsPresynapticHere: 0.8952s
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NeuronsPostsynapticHere: 0.9342s
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NeuronNeuronConnectivity: 0.7443s
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NeuronsSynaptic: 0.8742s
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NeuronsPresynapticHere: 0.8689s
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NeuronsPostsynapticHere: 0.8088s
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NeuronNeuronConnectivity: 0.8220s
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================================================================================
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ANATOMICAL HIERARCHY QUERIES
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================================================================================
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ComponentsOf: 0.7562s
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PartsOf: 0.5904s
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SubclassesOf: 0.7383s
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ComponentsOf: 0.6238s
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PartsOf: 0.7023s
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SubclassesOf: 0.7076s
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================================================================================
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TRACT/NERVE AND LINEAGE QUERIES
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================================================================================
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NeuronClassesFasciculatingHere: 0.8250s
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TractsNervesInnervatingHere: 0.7642s
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LineageClonesIn: 0.7019s
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NeuronClassesFasciculatingHere: 0.6327s
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TractsNervesInnervatingHere: 0.7945s
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LineageClonesIn: 0.6341s
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================================================================================
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IMAGE AND DEVELOPMENTAL QUERIES
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================================================================================
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ImagesNeurons: 0.9623s
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ImagesThatDevelopFrom: 0.6074s
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epFrag: 0.6142s
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ImagesNeurons: 1.1914s
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ImagesThatDevelopFrom: 0.7237s
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epFrag: 0.7073s
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================================================================================
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INSTANCE QUERIES
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================================================================================
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ListAllAvailableImages: 0.5957s
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ListAllAvailableImages: 0.6096s
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================================================================================
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CONNECTIVITY QUERIES
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================================================================================
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NeuronNeuronConnectivityQuery: 0.5969s
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NeuronRegionConnectivityQuery: 0.5891s
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NeuronNeuronConnectivityQuery: 0.7327s
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NeuronRegionConnectivityQuery: 0.6222s
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================================================================================
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SIMILARITY QUERIES (Neo4j NBLAST)
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SimilarMorphologyTo: 9.6916s
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SimilarMorphologyTo: 11.4931s
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================================================================================
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NEURON INPUT QUERIES (Neo4j)
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NeuronInputsTo: 2.8143s
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NeuronInputsTo: 2.8142s
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EXPRESSION PATTERN QUERIES (Neo4j)
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ExpressionOverlapsHere: 0.7588s
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ExpressionOverlapsHere: 0.7708s
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└─ Found 3922 total expression patterns, returned 10
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================================================================================
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TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
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anatScRNAseqQuery: 0.7091s
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anatScRNAseqQuery: 0.6743s
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└─ Found 0 total clusters
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clusterExpression: 0.7149s
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clusterExpression: 0.5813s
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└─ Found 0 genes expressed
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expressionCluster: 0.6248s
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expressionCluster: 0.5980s
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└─ Found 0 clusters expressing gene
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scRNAdatasetData: 0.7102s
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scRNAdatasetData: 0.6593s
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└─ Found 0 clusters in dataset
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================================================================================
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NBLAST SIMILARITY QUERIES
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SimilarMorphologyTo: 0.7862s
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SimilarMorphologyTo: 0.7738s
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└─ Found 227 NBLAST matches, returned 10
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SimilarMorphologyToPartOf: 0.6822s
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SimilarMorphologyToPartOf: 0.5750s
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└─ Found 0 NBLASTexp matches
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SimilarMorphologyToPartOfexp: 0.5579s
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SimilarMorphologyToPartOfexp: 0.6387s
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└─ Found 0 reverse NBLASTexp matches
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SimilarMorphologyToNB: 0.5143s
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SimilarMorphologyToNB: 2.1447s
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└─ Found 15 NeuronBridge matches, returned 10
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SimilarMorphologyToNBexp: 0.5115s
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SimilarMorphologyToNBexp: 0.5255s
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└─ Found 15 NeuronBridge expression matches, returned 10
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✅ All NBLAST similarity queries completed
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================================================================================
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DATASET/TEMPLATE QUERIES
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PaintedDomains: 0.5419s
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PaintedDomains: 0.7501s
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└─ Found 0 painted domains
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DatasetImages: 0.5856s
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DatasetImages: 0.5330s
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└─ Found 0 images in dataset
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AllAlignedImages: 0.4882s
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AllAlignedImages: 0.5306s
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└─ Found 0 aligned images
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AlignedDatasets: 0.7355s
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AlignedDatasets: 0.7615s
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└─ Found 0 aligned datasets
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AllDatasets: 0.7814s
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AllDatasets: 1.3396s
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└─ Found 115 total datasets, returned 20
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✅ All dataset/template queries completed
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================================================================================
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PUBLICATION/TRANSGENE QUERIES
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TermsForPub: 0.5591s
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TermsForPub: 0.4627s
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└─ Found 0 terms for publication
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TransgeneExpressionHere: 0.7860s
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TransgeneExpressionHere: 0.6039s
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└─ Found 2339 transgene expressions, returned 10
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✅ All publication/transgene queries completed
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==================================================
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Performance Test Results:
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==================================================
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FBbt_00003748 query took: 0.7018 seconds
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VFB_00101567 query took: 0.6724 seconds
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Total time for both queries: 1.3743 seconds
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FBbt_00003748 query took: 0.7501 seconds
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VFB_00101567 query took: 0.6250 seconds
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Total time for both queries: 1.3751 seconds
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Performance Level: 🟢 Excellent (< 1.5 seconds)
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==================================================
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Performance test completed successfully!
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- [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
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---
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*Last updated: 2025-11-17 15:18:41 UTC*
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*Last updated: 2025-11-17 15:27:32 UTC*

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