11# VFBquery Performance Test Results
22
3- ** Test Date:** 2025-11-17 14:43:36 UTC
4- ** Git Commit:** a8b7281f0d28e1141eb4c7dcd98caa465a885691
3+ ** Test Date:** 2025-11-17 15:03:03 UTC
4+ ** Git Commit:** 3638c79aae579806ec1bc3f8e5698b5fda8a2182
55** Branch:** dev
6- ** Workflow Run:** [ 19433447992 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/19433447992 )
6+ ** Workflow Run:** [ 19434068394 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/19434068394 )
77
88## Test Overview
99
@@ -116,7 +116,7 @@ test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerf
116116Test publication and transgene queries ... ok
117117
118118----------------------------------------------------------------------
119- Ran 15 tests in 56.724s
119+ Ran 15 tests in 47.104s
120120
121121OK
122122VFBquery caching enabled: TTL=2160h (90 days), Memory=2048MB
@@ -133,119 +133,119 @@ TERM INFO QUERIES
133133DEBUG: Cache lookup for FBbt_00003748: MISS
134134✅ Neo4j connection established
135135✅ Neo4j connection established
136- get_term_info (mushroom body): 4.6519s ✅
136+ get_term_info (mushroom body): 3.8586s ✅
137137DEBUG: Cache lookup for VFB_00101567: MISS
138- get_term_info (individual): 3.4954s ✅
138+ get_term_info (individual): 2.4280s ✅
139139
140140================================================================================
141141NEURON PART OVERLAP QUERIES
142142================================================================================
143- NeuronsPartHere: 1.1509s ✅
143+ NeuronsPartHere: 1.1175s ✅
144144
145145================================================================================
146146SYNAPTIC TERMINAL QUERIES
147147================================================================================
148- NeuronsSynaptic: 1.2397s ✅
149- NeuronsPresynapticHere: 1.0550s ✅
150- NeuronsPostsynapticHere: 1.0434s ✅
151- NeuronNeuronConnectivity: 2.2013s ✅
148+ NeuronsSynaptic: 1.2488s ✅
149+ NeuronsPresynapticHere: 0.8196s ✅
150+ NeuronsPostsynapticHere: 0.9611s ✅
151+ NeuronNeuronConnectivity: 0.8493s ✅
152152
153153================================================================================
154154ANATOMICAL HIERARCHY QUERIES
155155================================================================================
156- ComponentsOf: 0.9449s ✅
157- PartsOf: 0.9228s ✅
158- SubclassesOf: 1.0366s ✅
156+ ComponentsOf: 0.8437s ✅
157+ PartsOf: 0.8280s ✅
158+ SubclassesOf: 0.8250s ✅
159159
160160================================================================================
161161TRACT/NERVE AND LINEAGE QUERIES
162162================================================================================
163- NeuronClassesFasciculatingHere: 0.9301s ✅
164- TractsNervesInnervatingHere: 0.9174s ✅
165- LineageClonesIn: 0.9088s ✅
163+ NeuronClassesFasciculatingHere: 0.8196s ✅
164+ TractsNervesInnervatingHere: 0.8322s ✅
165+ LineageClonesIn: 0.8089s ✅
166166
167167================================================================================
168168IMAGE AND DEVELOPMENTAL QUERIES
169169================================================================================
170- ImagesNeurons: 1.5346s ✅
171- ImagesThatDevelopFrom: 0.9638s ✅
172- epFrag: 0.9350s ✅
170+ ImagesNeurons: 1.2955s ✅
171+ ImagesThatDevelopFrom: 0.8373s ✅
172+ epFrag: 0.8384s ✅
173173
174174================================================================================
175175INSTANCE QUERIES
176176================================================================================
177- ListAllAvailableImages: 0.9245s ✅
177+ ListAllAvailableImages: 0.8244s ✅
178178
179179================================================================================
180180CONNECTIVITY QUERIES
181181================================================================================
182- NeuronNeuronConnectivityQuery: 0.9152s ✅
183- NeuronRegionConnectivityQuery: 0.9281s ✅
182+ NeuronNeuronConnectivityQuery: 0.8346s ✅
183+ NeuronRegionConnectivityQuery: 0.8415s ✅
184184
185185================================================================================
186186SIMILARITY QUERIES (Neo4j NBLAST)
187187================================================================================
188- SimilarMorphologyTo: 11.1735s ✅
188+ SimilarMorphologyTo: 10.3082s ✅
189189
190190================================================================================
191191NEURON INPUT QUERIES (Neo4j)
192192================================================================================
193- NeuronInputsTo: 3.2100s ✅
193+ NeuronInputsTo: 2.7979s ✅
194194
195195================================================================================
196196EXPRESSION PATTERN QUERIES (Neo4j)
197197================================================================================
198- ExpressionOverlapsHere: 1.4845s ✅
198+ ExpressionOverlapsHere: 0.7753s ✅
199199 └─ Found 3922 total expression patterns, returned 10
200200
201201================================================================================
202202TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
203203================================================================================
204- anatScRNAseqQuery: 0.8474s ✅
204+ anatScRNAseqQuery: 0.7331s ✅
205205 └─ Found 0 total clusters
206- clusterExpression: 0.7670s ✅
206+ clusterExpression: 0.6986s ✅
207207 └─ Found 0 genes expressed
208- expressionCluster: 1.9591s ✅
208+ expressionCluster: 0.6664s ✅
209209 └─ Found 0 clusters expressing gene
210- scRNAdatasetData: 0.9264s ✅
210+ scRNAdatasetData: 0.6774s ✅
211211 └─ Found 0 clusters in dataset
212212
213213================================================================================
214214NBLAST SIMILARITY QUERIES
215215================================================================================
216- SimilarMorphologyTo: 1.0384s ✅
216+ SimilarMorphologyTo: 0.9129s ✅
217217 └─ Found 227 NBLAST matches, returned 10
218- SimilarMorphologyToPartOf: 0.7654s ✅
218+ SimilarMorphologyToPartOf: 0.6736s ✅
219219 └─ Found 0 NBLASTexp matches
220- SimilarMorphologyToPartOfexp: 0.7242s ✅
220+ SimilarMorphologyToPartOfexp: 0.6483s ✅
221221 └─ Found 0 reverse NBLASTexp matches
222- SimilarMorphologyToNB: 0.7132s ✅
222+ SimilarMorphologyToNB: 0.6422s ✅
223223 └─ Found 15 NeuronBridge matches, returned 10
224- SimilarMorphologyToNBexp: 0.6982s ✅
224+ SimilarMorphologyToNBexp: 0.6751s ✅
225225 └─ Found 15 NeuronBridge expression matches, returned 10
226226✅ All NBLAST similarity queries completed
227227
228228================================================================================
229229DATASET/TEMPLATE QUERIES
230230================================================================================
231- PaintedDomains: 0.7486s ✅
231+ PaintedDomains: 0.6959s ✅
232232 └─ Found 0 painted domains
233- DatasetImages: 0.7412s ✅
233+ DatasetImages: 0.6710s ✅
234234 └─ Found 0 images in dataset
235- AllAlignedImages: 0.7664s ✅
235+ AllAlignedImages: 0.6504s ✅
236236 └─ Found 0 aligned images
237- AlignedDatasets: 0.9794s ✅
237+ AlignedDatasets: 0.9015s ✅
238238 └─ Found 0 aligned datasets
239- AllDatasets: 0.9910s ✅
239+ AllDatasets: 0.9170s ✅
240240 └─ Found 115 total datasets, returned 20
241241✅ All dataset/template queries completed
242242
243243================================================================================
244244PUBLICATION/TRANSGENE QUERIES
245245================================================================================
246- TermsForPub: 0.6799s ✅
246+ TermsForPub: 0.6267s ✅
247247 └─ Found 0 terms for publication
248- TransgeneExpressionHere: 0.8066s ✅
248+ TransgeneExpressionHere: 0.7155s ✅
249249 └─ Found 2339 transgene expressions, returned 10
250250✅ All publication/transgene queries completed
251251
@@ -258,7 +258,7 @@ test_term_info_performance (src.test.term_info_queries_test.TermInfoQueriesTest)
258258Performance test for specific term info queries. ... ok
259259
260260----------------------------------------------------------------------
261- Ran 1 test in 1.890s
261+ Ran 1 test in 1.661s
262262
263263OK
264264VFBquery caching enabled: TTL=2160h (90 days), Memory=2048MB
@@ -273,9 +273,9 @@ VFBquery: Caching enabled by default (3-month TTL, 2GB memory)
273273==================================================
274274Performance Test Results:
275275==================================================
276- FBbt_00003748 query took: 0.9399 seconds
277- VFB_00101567 query took: 0.9499 seconds
278- Total time for both queries: 1.8898 seconds
276+ FBbt_00003748 query took: 0.8333 seconds
277+ VFB_00101567 query took: 0.8270 seconds
278+ Total time for both queries: 1.6603 seconds
279279Performance Level: 🟡 Good (1.5-3 seconds)
280280==================================================
281281Performance test completed successfully!
@@ -294,4 +294,4 @@ Track performance trends across commits:
294294- [ GitHub Actions History] ( https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml )
295295
296296---
297- * Last updated: 2025-11-17 14:43:36 UTC*
297+ * Last updated: 2025-11-17 15:03:03 UTC*
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