Update performance test results [skip ci]

Author: actions-user

performance.md

@@ -1,9 +1,9 @@
 # VFBquery Performance Test Results
 
-**Test Date:** 2026-02-02 04:17:08 UTC
-**Git Commit:** 149ffe79fba63cfa149929f34dbd46fd54136621
+**Test Date:** 2026-02-02 18:35:30 UTC
+**Git Commit:** 60c4054acb7286908d9cb8840b3ad8fb026d8851
 **Branch:** main
-**Workflow Run:** [21577138574](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/21577138574)
+**Workflow Run:** [21602545419](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/21602545419)
 
 ## Test Overview
 
@@ -95,7 +95,7 @@ Test anatomical hierarchy queries ... ok
 test_05_tract_lineage_queries (src.test.test_query_performance.QueryPerformanceTest)
 Test tract/nerve and lineage clone queries ... ok
 test_05b_image_queries (src.test.test_query_performance.QueryPerformanceTest)
-Test image and developmental lineage queries ... ok
+Test image and developmental lineage queries ... FAIL
 test_06_instance_queries (src.test.test_query_performance.QueryPerformanceTest)
 Test instance retrieval queries ... ok
 test_07_connectivity_queries (src.test.test_query_performance.QueryPerformanceTest)
@@ -115,10 +115,19 @@ Test dataset and template queries ... ok
 test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerformanceTest)
 Test publication and transgene queries ... ok
 
+======================================================================
+FAIL: test_05b_image_queries (src.test.test_query_performance.QueryPerformanceTest)
+Test image and developmental lineage queries
 ----------------------------------------------------------------------
-Ran 15 tests in 64.275s
+Traceback (most recent call last):
+  File "/home/runner/work/VFBquery/VFBquery/src/test/test_query_performance.py", line 284, in test_05b_image_queries
+    self.assertLess(duration, self.THRESHOLD_SLOW, "ImagesNeurons exceeded threshold")
+AssertionError: 35.765986919403076 not less than 15.0 : ImagesNeurons exceeded threshold
 
-OK
+----------------------------------------------------------------------
+Ran 15 tests in 83.217s
+
+FAILED (failures=1)
 VFBquery functions patched with caching support
 VFBquery: SOLR caching enabled by default (3-month TTL)
          Disable with: export VFBQUERY_CACHE_ENABLED=false
@@ -128,118 +137,116 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
 ================================================================================
 TERM INFO QUERIES
 ================================================================================
-get_term_info (mushroom body): 2.3683s ✅
-get_term_info (individual): 2.5339s ✅
+get_term_info (mushroom body): 2.1200s ✅
+get_term_info (individual): 1.5530s ✅
 
 ================================================================================
 NEURON PART OVERLAP QUERIES
 ================================================================================
-NeuronsPartHere: 2.3378s ✅
+NeuronsPartHere: 2.5589s ✅
 
 ================================================================================
 SYNAPTIC TERMINAL QUERIES
 ================================================================================
-NeuronsSynaptic: 2.2107s ✅
-NeuronsPresynapticHere: 2.1013s ✅
-NeuronsPostsynapticHere: 2.1857s ✅
-NeuronNeuronConnectivity: 1.9037s ✅
+NeuronsSynaptic: 2.0732s ✅
+NeuronsPresynapticHere: 1.2742s ✅
+NeuronsPostsynapticHere: 1.7829s ✅
+NeuronNeuronConnectivity: 3.1229s ✅
 
 ================================================================================
 ANATOMICAL HIERARCHY QUERIES
 ================================================================================
-ComponentsOf: 1.7692s ✅
-PartsOf: 1.7630s ✅
-SubclassesOf: 1.7574s ✅
+ComponentsOf: 1.3371s ✅
+PartsOf: 1.4569s ✅
+SubclassesOf: 1.4793s ✅
 
 ================================================================================
 TRACT/NERVE AND LINEAGE QUERIES
 ================================================================================
-NeuronClassesFasciculatingHere: 1.7693s ✅
-TractsNervesInnervatingHere: 1.7604s ✅
-LineageClonesIn: 1.7664s ✅
+NeuronClassesFasciculatingHere: 1.3084s ✅
+TractsNervesInnervatingHere: 1.3509s ✅
+LineageClonesIn: 1.3383s ✅
 
 ================================================================================
 IMAGE AND DEVELOPMENTAL QUERIES
 ================================================================================
-ImagesNeurons: 1.7720s ✅
-ImagesThatDevelopFrom: 1.7838s ✅
-epFrag: 1.7635s ✅
+ImagesNeurons: 35.7660s ✅
 
 ================================================================================
 INSTANCE QUERIES
 ================================================================================
-ListAllAvailableImages: 1.7647s ✅
+ListAllAvailableImages: 2.1054s ✅
 
 ================================================================================
 CONNECTIVITY QUERIES
 ================================================================================
-NeuronNeuronConnectivityQuery: 1.7660s ✅
-NeuronRegionConnectivityQuery: 1.7998s ✅
+NeuronNeuronConnectivityQuery: 1.2560s ✅
+NeuronRegionConnectivityQuery: 1.5479s ✅
 
 ================================================================================
 SIMILARITY QUERIES (Neo4j NBLAST)
 ================================================================================
-SimilarMorphologyTo: 1.0433s ✅
+SimilarMorphologyTo: 0.7433s ✅
 
 ================================================================================
 NEURON INPUT QUERIES (Neo4j)
 ================================================================================
-NeuronInputsTo: 3.4916s ✅
+NeuronInputsTo: 4.4323s ✅
 
 ================================================================================
 EXPRESSION PATTERN QUERIES (Neo4j)
 ================================================================================
-ExpressionOverlapsHere: 3.9390s ✅
+ExpressionOverlapsHere: 0.8076s ✅
   └─ Found 3922 total expression patterns, returned 10
 
 ================================================================================
 TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
 ================================================================================
-anatScRNAseqQuery: 0.7731s ✅
+anatScRNAseqQuery: 2.3144s ✅
   └─ Found 0 total clusters
-clusterExpression: 1.4449s ✅
+clusterExpression: 0.7042s ✅
   └─ Found 0 genes expressed
-expressionCluster: 0.7145s ✅
+expressionCluster: 0.6249s ✅
   └─ Found 0 clusters expressing gene
-scRNAdatasetData: 0.9069s ✅
+scRNAdatasetData: 0.6474s ✅
   └─ Found 0 clusters in dataset
 
 ================================================================================
 NBLAST SIMILARITY QUERIES
 ================================================================================
-SimilarMorphologyTo: 5.0523s ✅
+SimilarMorphologyTo: 0.7777s ✅
   └─ Found 215 NBLAST matches, returned 10
-SimilarMorphologyToPartOf: 0.8313s ✅
+SimilarMorphologyToPartOf: 0.5169s ✅
   └─ Found 0 NBLASTexp matches
-SimilarMorphologyToPartOfexp: 0.8272s ✅
+SimilarMorphologyToPartOfexp: 1.8347s ✅
   └─ Found 0 reverse NBLASTexp matches
-SimilarMorphologyToNB: 0.6831s ✅
+SimilarMorphologyToNB: 0.5399s ✅
   └─ Found 15 NeuronBridge matches, returned 10
-SimilarMorphologyToNBexp: 0.7038s ✅
+SimilarMorphologyToNBexp: 0.6754s ✅
   └─ Found 15 NeuronBridge expression matches, returned 10
 ✅ All NBLAST similarity queries completed
 
 ================================================================================
 DATASET/TEMPLATE QUERIES
 ================================================================================
-PaintedDomains: 0.7336s ✅
+PaintedDomains: 0.7101s ✅
   └─ Found 0 painted domains
-DatasetImages: 0.6871s ✅
+DatasetImages: 0.5013s ✅
   └─ Found 0 images in dataset
-AllAlignedImages: 1.2738s ✅
+AllAlignedImages: 0.6046s ✅
   └─ Found 0 aligned images
-AlignedDatasets: 0.9392s ✅
+AlignedDatasets: 1.3742s ✅
   └─ Found 0 aligned datasets
-AllDatasets: 1.0711s ✅
+AllDatasets: 0.7931s ✅
   └─ Found 116 total datasets, returned 20
 ✅ All dataset/template queries completed
 
 ================================================================================
 PUBLICATION/TRANSGENE QUERIES
 ================================================================================
-TermsForPub: 0.6462s ✅
+TermsForPub: 0.4879s ✅
   └─ Found 0 terms for publication
-TransgeneExpressionHere: 1.6328s ✅
+TransgeneExpressionHere: 0.6897s ✅
   └─ Found 2346 transgene expressions, returned 10
 ✅ All publication/transgene queries completed
 
@@ -252,7 +259,7 @@ test_term_info_performance (src.test.term_info_queries_test.TermInfoQueriesTest)
 Performance test for specific term info queries. ... ok
 
 ----------------------------------------------------------------------
-Ran 1 test in 3.597s
+Ran 1 test in 2.584s
 
 OK
 VFBquery functions patched with caching support
@@ -262,10 +269,10 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
 ==================================================
 Performance Test Results:
 ==================================================
-FBbt_00003748 query took: 1.8087 seconds
-VFB_00101567 query took: 1.7878 seconds
-Total time for both queries: 3.5965 seconds
-Performance Level: 🟠 Acceptable (3-6 seconds)
+FBbt_00003748 query took: 1.3311 seconds
+VFB_00101567 query took: 1.2528 seconds
+Total time for both queries: 2.5838 seconds
+Performance Level: 🟡 Good (1.5-3 seconds)
 ==================================================
 Performance test completed successfully!
 ```
@@ -283,4 +290,4 @@ Track performance trends across commits:
 - [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
 
 ---
-*Last updated: 2026-02-02 04:17:08 UTC*
+*Last updated: 2026-02-02 18:35:30 UTC*