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Robbie1977Robbie1977
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Add new queries for medulla-related data retrieval in README
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‎README.md‎

Lines changed: 251 additions & 0 deletions
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@@ -718,6 +718,257 @@ vfb.get_term_info('FBbt_00003748')
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},
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"output_format": "table",
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"count": 0
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},
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{
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"query": "TractsNervesInnervatingHere",
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"label": "Tracts/nerves innervating medulla",
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"function": "get_tracts_nerves_innervating_here",
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"takes": {
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"short_form": {
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"$and": [
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"Class",
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"Synaptic_neuropil"
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]
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},
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"default": {
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"short_form": "FBbt_00003748"
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}
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},
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"preview": 5,
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"preview_columns": [
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"id",
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"label",
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"tags",
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"thumbnail"
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],
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"preview_results": {
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"headers": {
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"id": {
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"title": "Add",
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"type": "selection_id",
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"order": -1
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},
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"label": {
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"title": "Name",
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"type": "markdown",
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"order": 0,
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"sort": {
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"0": "Asc"
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}
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},
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"tags": {
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"title": "Tags",
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"type": "tags",
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"order": 2
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},
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"thumbnail": {
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"title": "Thumbnail",
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"type": "markdown",
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"order": 9
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}
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},
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"rows": [
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{
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"id": "FBbt_00003922",
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"label": "[second optic chiasma](FBbt_00003922)",
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"tags": "Adult|Nervous_system|Neuron_projection_bundle|Visual_system",
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"thumbnail": ""
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}
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],
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"count": 3
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},
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"output_format": "table",
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"count": 3
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},
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{
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"query": "LineageClonesIn",
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"label": "Lineage clones found in medulla",
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"function": "get_lineage_clones_in",
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"takes": {
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"short_form": {
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"$and": [
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"Class",
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"Synaptic_neuropil"
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]
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},
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"default": {
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"short_form": "FBbt_00003748"
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}
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},
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"preview": 5,
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"preview_columns": [
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"id",
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"label",
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"tags",
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"thumbnail"
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],
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"preview_results": {
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"headers": {
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"id": {
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"title": "Add",
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"type": "selection_id",
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"order": -1
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},
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"label": {
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"title": "Name",
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"type": "markdown",
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"order": 0,
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"sort": {
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"0": "Asc"
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}
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},
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"tags": {
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"title": "Tags",
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"type": "tags",
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"order": 2
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},
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"thumbnail": {
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"title": "Thumbnail",
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"type": "markdown",
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"order": 9
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}
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},
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"rows": [
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{
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"id": "FBbt_00050013",
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"label": "[adult VPNl&d1 lineage clone](FBbt_00050013)",
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"tags": "Adult|Clone",
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"thumbnail": "[![VPNl&d1 clone of Ito 2013 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/0002/0253/VFB_00101567/thumbnail.png 'VPNl&d1 clone of Ito 2013 aligned to JRC2018U')](FBbt_00050013)"
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}
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],
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"count": 7
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},
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"output_format": "table",
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"count": 7
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},
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{
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"query": "ImagesNeurons",
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"label": "Images of neurons with some part in medulla",
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"function": "get_images_neurons",
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"takes": {
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"short_form": {
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"$and": [
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"Class",
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"Synaptic_neuropil"
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]
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},
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"default": {
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"short_form": "FBbt_00003748"
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}
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},
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"preview": 5,
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"preview_columns": [
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"id",
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"label",
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"tags",
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"thumbnail"
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],
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"preview_results": {
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"headers": {
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"id": {
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"title": "Add",
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"type": "selection_id",
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"order": -1
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},
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"label": {
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"title": "Name",
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"type": "markdown",
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"order": 0,
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"sort": {
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"0": "Asc"
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}
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},
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"tags": {
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"title": "Tags",
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"type": "tags",
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"order": 2
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},
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"thumbnail": {
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"title": "Thumbnail",
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"type": "markdown",
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"order": 9
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}
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},
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"rows": [
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{
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"id": "VFB_fw113167",
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"label": "[ME.11974](VFB_fw113167)",
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"tags": "Adult|Glutamatergic|Nervous_system|Visual_system",
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"thumbnail": ""
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}
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],
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"count": 119989
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},
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"output_format": "table",
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"count": 119989
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},
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{
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"query": "ExpressionOverlapsHere",
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"label": "Expression patterns overlapping medulla",
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"function": "get_expression_overlaps_here",
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"takes": {
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"short_form": {
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"$and": [
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"Class",
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"Anatomy"
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]
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},
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"default": {
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"short_form": "FBbt_00003748"
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}
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},
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"preview": 5,
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"preview_columns": [
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"id",
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"name",
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"tags",
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"pubs"
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],
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"preview_results": {
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"headers": [
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"id",
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"name",
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"tags",
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"pubs"
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],
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"rows": [],
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"count": 0
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},
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"output_format": "table",
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"count": 0
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},
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{
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"query": "TransgeneExpressionHere",
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"label": "Transgene expression in medulla",
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"function": "get_transgene_expression_here",
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"takes": {
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"short_form": {
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"$and": [
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"Class",
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"Anatomy"
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]
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},
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"default": {
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"short_form": "FBbt_00003748"
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}
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},
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"preview": 5,
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"preview_columns": [
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"id",
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"name",
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"tags"
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],
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"preview_results": {
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"headers": [
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"id",
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"name",
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"tags"
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],
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"rows": [],
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"count": 0
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},
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"output_format": "table",
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"count": 0
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}
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],
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"IsIndividual": False,

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