11# VFBquery Performance Test Results
22
3- ** Test Date:** 2026-04-27 05:18:20 UTC
4- ** Git Commit:** 52835680c8158f2ce1c69c1cc1287b98ea6f5245
3+ ** Test Date:** 2026-04-27 13:58:25 UTC
4+ ** Git Commit:** 604d2631cfc3d6c865e13591c1f9b360656cab9a
55** Branch:** main
6- ** Workflow Run:** [ 24977827140 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/24977827140 )
6+ ** Workflow Run:** [ 24999263993 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/24999263993 )
77
88## Test Overview
99
@@ -116,7 +116,7 @@ test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerf
116116Test publication and transgene queries ... ok
117117
118118----------------------------------------------------------------------
119- Ran 15 tests in 62.901s
119+ Ran 15 tests in 85.850s
120120
121121OK
122122VFBquery functions patched with caching support
@@ -128,118 +128,118 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
128128================================================================================
129129TERM INFO QUERIES
130130================================================================================
131- get_term_info (mushroom body): 2.1926s ✅
132- get_term_info (individual): 1.7179s ✅
131+ get_term_info (mushroom body): 2.5972s ✅
132+ get_term_info (individual): 2.2501s ✅
133133
134134================================================================================
135135NEURON PART OVERLAP QUERIES
136136================================================================================
137- NeuronsPartHere: 2.0128s ✅
137+ NeuronsPartHere: 3.2654s ✅
138138
139139================================================================================
140140SYNAPTIC TERMINAL QUERIES
141141================================================================================
142- NeuronsSynaptic: 1.7981s ✅
143- NeuronsPresynapticHere: 1.5078s ✅
144- NeuronsPostsynapticHere: 1.6880s ✅
145- NeuronNeuronConnectivity: 1.4332s ✅
142+ NeuronsSynaptic: 2.5546s ✅
143+ NeuronsPresynapticHere: 2.4091s ✅
144+ NeuronsPostsynapticHere: 2.3381s ✅
145+ NeuronNeuronConnectivity: 2.1475s ✅
146146
147147================================================================================
148148ANATOMICAL HIERARCHY QUERIES
149149================================================================================
150- ComponentsOf: 1.3764s ✅
151- PartsOf: 1.3919s ✅
152- SubclassesOf: 1.4462s ✅
150+ ComponentsOf: 2.1619s ✅
151+ PartsOf: 3.1002s ✅
152+ SubclassesOf: 1.8773s ✅
153153
154154================================================================================
155155TRACT/NERVE AND LINEAGE QUERIES
156156================================================================================
157- NeuronClassesFasciculatingHere: 1.3680s ✅
158- TractsNervesInnervatingHere: 1.3861s ✅
159- LineageClonesIn: 1.3756s ✅
157+ NeuronClassesFasciculatingHere: 2.2758s ✅
158+ TractsNervesInnervatingHere: 2.0787s ✅
159+ LineageClonesIn: 2.1340s ✅
160160
161161================================================================================
162162IMAGE AND DEVELOPMENTAL QUERIES
163163================================================================================
164- ImagesNeurons: 2.5037s ✅
165- ImagesThatDevelopFrom: 1.4238s ✅
166- epFrag: 1.3793s ✅
164+ ImagesNeurons: 3.4862s ✅
165+ ImagesThatDevelopFrom: 2.1102s ✅
166+ epFrag: 2.0179s ✅
167167
168168================================================================================
169169INSTANCE QUERIES
170170================================================================================
171- ListAllAvailableImages: 1.3771s ✅
171+ ListAllAvailableImages: 2.1202s ✅
172172
173173================================================================================
174174CONNECTIVITY QUERIES
175175================================================================================
176- NeuronNeuronConnectivityQuery: 1.3953s ✅
177- NeuronRegionConnectivityQuery: 1.3827s ✅
176+ NeuronNeuronConnectivityQuery: 1.8865s ✅
177+ NeuronRegionConnectivityQuery: 1.8401s ✅
178178
179179================================================================================
180180SIMILARITY QUERIES (Neo4j NBLAST)
181181================================================================================
182- SimilarMorphologyTo: 0.7342s ✅
182+ SimilarMorphologyTo: 0.9637s ✅
183183
184184================================================================================
185185NEURON INPUT QUERIES (Neo4j)
186186================================================================================
187- NeuronInputsTo: 3.6817s ✅
187+ NeuronInputsTo: 3.6342s ✅
188188
189189================================================================================
190190EXPRESSION PATTERN QUERIES (Neo4j)
191191================================================================================
192- ExpressionOverlapsHere: 1.0360s ✅
192+ ExpressionOverlapsHere: 1.3265s ✅
193193 └─ Found 3922 total expression patterns, returned 10
194194
195195================================================================================
196196TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
197197================================================================================
198- anatScRNAseqQuery: 0.6847s ✅
198+ anatScRNAseqQuery: 0.9345s ✅
199199 └─ Found 57 total clusters, returned 10
200- clusterExpression: 0.9862s ✅
200+ clusterExpression: 1.4174s ✅
201201 └─ Found 4588 genes expressed, returned 10
202- expressionCluster: 0.8024s ✅
202+ expressionCluster: 0.8900s ✅
203203 └─ Found 9 clusters expressing gene
204- scRNAdatasetData: 0.7985s ✅
204+ scRNAdatasetData: 0.8496s ✅
205205 └─ Found 13 clusters in dataset, returned 10
206206
207207================================================================================
208208NBLAST SIMILARITY QUERIES
209209================================================================================
210- SimilarMorphologyTo: 1.0530s ✅
210+ SimilarMorphologyTo: 1.1518s ✅
211211 └─ Found 215 NBLAST matches, returned 10
212- SimilarMorphologyToPartOf: 0.5644s ✅
212+ SimilarMorphologyToPartOf: 0.7267s ✅
213213 └─ Found 0 NBLASTexp matches
214- SimilarMorphologyToPartOfexp: 0.6903s ✅
214+ SimilarMorphologyToPartOfexp: 0.7121s ✅
215215 └─ Found 0 reverse NBLASTexp matches
216- SimilarMorphologyToNB: 0.5934s ✅
216+ SimilarMorphologyToNB: 1.0529s ✅
217217 └─ Found 15 NeuronBridge matches, returned 10
218- SimilarMorphologyToNBexp: 0.5983s ✅
218+ SimilarMorphologyToNBexp: 0.8621s ✅
219219 └─ Found 15 NeuronBridge expression matches, returned 10
220220✅ All NBLAST similarity queries completed
221221
222222================================================================================
223223DATASET/TEMPLATE QUERIES
224224================================================================================
225- PaintedDomains: 0.7214s ✅
225+ PaintedDomains: 1.0898s ✅
226226 └─ Found 46 painted domains, returned 10
227- DatasetImages: 0.6326s ✅
227+ DatasetImages: 0.9781s ✅
228228 └─ Found 46 images in dataset, returned 10
229- AllAlignedImages: 2.5845s ✅
229+ AllAlignedImages: 2.8711s ✅
230230 └─ Found 527179 aligned images, returned 10
231- AlignedDatasets: 0.7115s ✅
232- └─ Found 72 aligned datasets, returned 10
233- AllDatasets: 0.7820s ✅
231+ AlignedDatasets: 1.1188s ✅
232+ └─ Found 86 aligned datasets, returned 10
233+ AllDatasets: 1.1263s ✅
234234 └─ Found 130 total datasets, returned 20
235235✅ All dataset/template queries completed
236236
237237================================================================================
238238PUBLICATION/TRANSGENE QUERIES
239239================================================================================
240- TermsForPub: 0.7944s ✅
240+ TermsForPub: 0.9016s ✅
241241 └─ Found 2 terms for publication
242- TransgeneExpressionHere: 1.4529s ✅
242+ TransgeneExpressionHere: 1.7343s ✅
243243 └─ Found 2340 transgene expressions, returned 10
244244✅ All publication/transgene queries completed
245245
@@ -252,7 +252,7 @@ test_term_info_performance (src.test.term_info_queries_test.TermInfoQueriesTest)
252252Performance test for specific term info queries. ... ok
253253
254254----------------------------------------------------------------------
255- Ran 1 test in 2.918s
255+ Ran 1 test in 3.915s
256256
257257OK
258258VFBquery functions patched with caching support
@@ -262,10 +262,10 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
262262==================================================
263263Performance Test Results:
264264==================================================
265- FBbt_00003748 query took: 1.4376 seconds
266- VFB_00101567 query took: 1.4797 seconds
267- Total time for both queries: 2.9173 seconds
268- Performance Level: 🟡 Good (1.5-3 seconds)
265+ FBbt_00003748 query took: 1.9697 seconds
266+ VFB_00101567 query took: 1.9452 seconds
267+ Total time for both queries: 3.9149 seconds
268+ Performance Level: 🟠 Acceptable (3-6 seconds)
269269==================================================
270270Performance test completed successfully!
271271```
@@ -283,4 +283,4 @@ Track performance trends across commits:
283283- [ GitHub Actions History] ( https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml )
284284
285285---
286- * Last updated: 2026-04-27 05:18:20 UTC*
286+ * Last updated: 2026-04-27 13:58:25 UTC*
0 commit comments